Pseudomonas cannabina pv. alisalensis: JGS08_16245
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Entry
JGS08_16245 CDS
T07379
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00362
Benzoate degradation
pcab01100
Metabolic pathways
pcab01120
Microbial metabolism in diverse environments
pcab01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JGS08_16245 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
JGS08_16245 (pcaH)
Enzymes [BR:
pcab01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
JGS08_16245 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
QQN20183
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Position
complement(3606760..3607479)
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AA seq
239 aa
AA seq
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MSAADNSRFVIRDRNWHPKALTPDYKTSILRSPRQALVSIPQSISETSGPDFSHLQFGPH
DNDLLLNFNHGGLPIGERILIAGRVCDQYGKPIPHTLVEIWQANAGGRYRHKRDAYLAPI
DPNFGGVGRALTDSEGNYSFRTVKPGPYPWRNGPNDWRPAHVHVSISGPSIATRLITQLY
FEGDPLIPICPIVKSITNPDAVQSLIARLDLALGNPMDCLAYRFDIVLRGQRKTHFENG
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgcggacaacagccgcttcgtcattcgtgaccgaaactggcacccgaaagcc
ctgaccccggactacaagacttcgatcctgcgctcgccgcgccaggcgctggtcagtatt
ccgcaatccatttccgagacctcaggcccggacttttcgcatctgcagttcggcccgcac
gacaacgacctgttgctcaatttcaatcacggtggcttgccgatcggcgagcgcatcctg
attgccggtcgggtctgcgatcagtacggcaagccgatcccccatacgctggtggaaatc
tggcaggccaatgcgggcggtcgctaccgtcataagcgcgatgcctacctggcacctatc
gaccccaatttcggcggcgtcgggcgcgcactgaccgacagcgaaggcaactacagcttc
cggaccgtcaagcctggcccgtacccgtggcgcaacggccccaacgactggcgtccggcc
catgtgcatgtgtcgatcagcggcccgtcgatcgccacacgcttgatcacgcagttgtat
ttcgaaggcgatccgctgattccgatctgcccgatcgtcaagtcgatcaccaacccggat
gcggtgcaaagcctgatcgcccggctcgatctggcactgggcaacccgatggattgcctg
gcgtatcgctttgacatcgtgttgcgcggtcagcgcaagacgcacttcgaaaacggctga
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