Pseudomonas cannabina pv. alisalensis: JGS08_21680
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Entry
JGS08_21680 CDS
T07379
Name
(GenBank) HAD family hydrolase
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00540
Lipopolysaccharide biosynthesis
pcab01100
Metabolic pathways
pcab01250
Biosynthesis of nucleotide sugars
Module
pcab_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
JGS08_21680
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcab01005
]
JGS08_21680
Enzymes [BR:
pcab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
JGS08_21680
Lipopolysaccharide biosynthesis proteins [BR:
pcab01005
]
Lipid A
JGS08_21680
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Motif
Pfam:
Hydrolase_3
Hydrolase
HAD_2
HAD
Motif
Other DBs
NCBI-ProteinID:
QQN21173
LinkDB
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Position
4833798..4834337
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AA seq
179 aa
AA seq
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METRTMNPELMQRGKAIKLAVFDVDGVLTDGRLFFLEDGSEIKTFNTLDGQGIKMLIASG
VTTAIISGRKTAIVERRAKSLGIAHLFQGREDKLVVLDQLLAELKLDYEQVAYLGDDLPD
LPVIRRVGLGMAVANAAGFVREHAHGITKARGGEGAAREFCELILSAQGNLEAAHSAYL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccagaacgatgaacccggaactcatgcaacgcggcaaggccatcaaactcgcg
gttttcgatgtcgatggcgtcctgactgacggccgcctgttctttctggaagacggcagc
gagatcaagacattcaacacgctggacgggcaaggcataaaaatgctgatagcttccggc
gtgacgaccgccattatcagcggtcgcaagactgcaatcgtcgagcgccgggcaaagagc
ctgggcatcgcacacctttttcaaggccgcgaagataaactggtcgtactggaccaattg
ctggcagagttgaaacttgattacgaacaagtcgcctatctgggtgacgatctgccagac
ttgccggtcatccggcgtgtcggcctgggcatggcagtggccaatgcggcaggctttgtc
cgcgagcatgcacacggaataaccaaggcgcgaggcggcgaaggtgcggcgcgcgaattc
tgcgaactgatcctgagtgcgcaaggcaaccttgaagcggctcactccgcctatttatag
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