Pseudomonas cannabina pv. alisalensis: JGS08_22425
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Entry
JGS08_22425 CDS
T07379
Symbol
selD
Name
(GenBank) selenide, water dikinase SelD
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00450
Selenocompound metabolism
pcab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JGS08_22425 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcab03016
]
JGS08_22425 (selD)
Enzymes [BR:
pcab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
JGS08_22425 (selD)
Transfer RNA biogenesis [BR:
pcab03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
JGS08_22425 (selD)
Prokaryotic type
JGS08_22425 (selD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
QQN21302
LinkDB
All DBs
Position
complement(5009545..5010579)
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AA seq
344 aa
AA seq
DB search
MNEPIRLTQYSHGAGCGCKISPKVLDVILAGSGAQNLDPKLWVGNTSRDDAAVYALDDER
GVVSTTDFFMPIVDDPFDFGRIAATNAISDIYAMGGDPLMAIAILGWPVNLLPPEVAREV
IHGGRAVCDAAGIPLAGGHSIDAPEPIFGLAVTGVVQKKHMKRNDTAQAGCTLYLTKPLG
IGILTTAEKKSKLRDEDVGLARDWMCTLNKPGSRFGKLAGVLAMTDVTGFGLLGHLVEMA
DGAGLTARLDYAAVPRLPGVDHYIAEGCVPGGTLRNYESYGDKIATLSDAQRDLLCDPQT
SGGLLVAVSPEGEAEFLAVAAELGLLLNPIGTLLERQTHAVEVF
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagccaatccgcctgacccagtacagtcacggagcggggtgtggctgcaagatt
tcccccaaagtgctggatgtgatcctcgccggcagcggcgcgcagaacctcgacccgaag
ctctgggtcggcaatacctcgcgtgacgacgccgcggtttacgcgctggacgacgagcgc
ggcgtggtctcgaccaccgacttcttcatgcccatcgtcgatgaccccttcgacttcggc
cgcatcgcggcgaccaacgcgatcagcgatatttatgcgatgggcggcgacccgctgatg
gccattgcgattctcggctggccggtcaatctgctgccgcccgaagtggcccgcgaagtg
atccacggcggtcgcgcggtgtgcgatgcagcgggcatcccgttggcgggcgggcattcc
attgatgcgccggagccgatcttcggcctggccgtcaccggcgtggtgcagaaaaagcac
atgaaacgcaatgacacggcccaggccggctgcacgctgtacctgaccaaaccactgggc
atcggcattctgaccaccgccgaaaagaagtcaaagttgcgcgacgaggatgtcggcctg
gcgcgagactggatgtgtaccctgaacaagccgggcagccgcttcggcaagctggccggt
gtgctggccatgaccgatgtcaccggcttcggcctgcttgggcatctggttgaaatggct
gatggcgccgggctgaccgctcgtcttgattacgccgcagtgccgcgcctgccgggtgtc
gatcactacattgccgagggctgcgtgccgggcggcacactgcgcaattacgaaagctat
ggcgacaagatcgcaacgctgagcgatgcccagcgcgacctgttgtgcgatccgcagacc
agcggcggcttgctggtcgcggtcagcccggaaggtgaggcggagtttctggcggtggcg
gccgaactgggcctgctgctcaacccgatcggcaccttgctcgagcgacagacacacgcc
gtcgaggtgttctga
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