Pseudomonas cannabina pv. alisalensis: JGS08_24725
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Entry
JGS08_24725 CDS
T07379
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00730
Thiamine metabolism
pcab01100
Metabolic pathways
pcab01240
Biosynthesis of cofactors
pcab04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JGS08_24725 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
JGS08_24725 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcab03016
]
JGS08_24725 (thiI)
Enzymes [BR:
pcab01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
JGS08_24725 (thiI)
Transfer RNA biogenesis [BR:
pcab03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JGS08_24725 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
MetW
Motif
Other DBs
NCBI-ProteinID:
QQN21724
LinkDB
All DBs
Position
complement(5558702..5560156)
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AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSPPVRKKFIRQLGKNIRTVLRELDADIVVGGVWDNLEVETRQTDPK
VLQGIRERLSCMPGIANFLQVAEYPLGDLDDIVAKCKLHYADLLPGKMFSVRCRRAGRHD
FSSMDVEKYVGSKLRMQCGAAGIELKKPDLVVRMEIRDQRLFVVHDQHKGMGGYPLGALE
QTLVLMSGGFDSTVAAYQVMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL
FVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEIDVLVTGEAISQVASQTL
PNLSLIDAATDKLVLRPLVATHKQDIVDLATEIGTADFARHMPEYCGVISVNPKTNAKRN
RVEYEEKQFDMAILEQALERARLVSIDRVIDDLSRNVDIEEVSQALAGQVIIDIRHPDAQ
EDQPLQVPGVEIQTLPFYALNSRFKALDDTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatcgttaaagttttcccagaaatcaccatcaagagcccgccggttcgcaag
aagttcatccggcagttgggcaagaacattcgtaccgtgctccgggaactggacgcggac
attgtcgtgggtggtgtatgggacaatcttgaggtcgagacccgccagaccgaccccaaa
gtgctgcagggcatcagggaacggctgagctgcatgccgggcatcgccaactttctgcaa
gtggccgagtacccgctgggtgacctggacgacatcgttgccaagtgcaaactgcactat
gccgacctgctgccgggcaagatgttttcggtgcgttgcaggcgcgccggtcgccacgat
ttcagctccatggatgtcgagaaatacgtcggcagcaagctgcgcatgcaatgcggcgcg
gccggaatcgagctgaaaaagcccgatctggtggtgcggatggaaattcgcgaccaacgg
ttgtttgtggttcacgaccagcataaaggcatgggcggctacccgctgggtgcgctggag
cagactctggtattgatgtccggcggtttcgattcgaccgttgcggcctaccaggtcatg
cgccgcggcctgatggcgcacttctgcttcttcaatctgggcggacgagcccacgagctg
ggcgtaatggaagtcgcgcatttcatctggaagaagtacggcagttcgcagcgtgtgctg
ttcgtcagcgtaccgttcgaggaagttctcggagaaattctgcagaaagtcgataacagt
catatgggtgtagttttgaagcgtatgatgttacgcgctgcatccgcggtggctgatcgt
ctcgaaatcgacgtgctggttactggcgaagcgatttcacaggttgccagccagacgctg
ccgaacctgtcgctgatcgacgcggcgaccgacaagctggtgttgcgaccgctggttgca
acccacaagcaggacatcgtggacttggcgactgaaatcggtaccgccgattttgcccgg
cacatgcctgagtattgcggggtgatttcggtcaaccccaagaccaacgccaagcgtaat
cgcgttgagtacgaagaaaagcagttcgacatggcgattctcgagcaagcgctcgaacgc
gccaggctggtttcgatcgatcgggtgatcgacgatctgagccgcaatgtcgacattgaa
gaagtcagccaggcgctggccggccaggtcatcatcgacatccgtcacccggatgcccag
gaagaccagccgctgcaagtgcccggcgtggagatacagacgttgccgttctacgcattg
aatagccgcttcaaggcactggatgacacgcgccagtacctgctgtattgcgacaaaggc
gtcatgagtcgcctgcatgctcaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
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