Physeter catodon (sperm whale): 102979086
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Entry
102979086 CDS
T06011
Name
(RefSeq) LOW QUALITY PROTEIN: vascular cell adhesion protein 1-like
KO
K06527
vascular cell adhesion molecule 1
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04064
NF-kappa B signaling pathway
pcad04514
Cell adhesion molecules
pcad04668
TNF signaling pathway
pcad04670
Leukocyte transendothelial migration
pcad04933
AGE-RAGE signaling pathway in diabetic complications
pcad05143
African trypanosomiasis
pcad05144
Malaria
pcad05417
Lipid and atherosclerosis
pcad05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
102979086
04668 TNF signaling pathway
102979086
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102979086
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
102979086
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
102979086
05143 African trypanosomiasis
102979086
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102979086
05418 Fluid shear stress and atherosclerosis
102979086
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102979086
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pcad04090
]
102979086
04091 Lectins [BR:
pcad04091
]
102979086
CD molecules [BR:
pcad04090
]
Proteins
102979086
Lectins [BR:
pcad04091
]
I-type lectins (Siglecs)
102979086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set
Ig_3
I-set
ig
Ig_2
V-set
Ig_6
Ig_4
Ig_5
ICAM1_3_5_D2
ICAM_N
Receptor_2B4
C1-set
Motif
Other DBs
NCBI-GeneID:
102979086
NCBI-ProteinID:
XP_054947287
UniProt:
A0A9W2X789
LinkDB
All DBs
Position
15:complement(46253419..46256048)
Genome browser
AA seq
655 aa
AA seq
DB search
MTMDLVSLGNEHYYLCTVICESQKLEEKIPVEIYSFPKDPEIHLSGSLEVGKPVTVTCLV
PAVYPFEKLEILLLKGNRSMKTQNFLEPSEMKSQETKSLEVTFTPIDEDIGKALVCXATV
HINEIDSQPQVQETXKKLQVYVSPKDTVISVNPSTSLQEDDSVMMTCTSEGLPAPQIFRS
KKLDIGNLQLLSENATLTLIAMRMEDSGIYVCEGVNLVGKDRKEVKLIVQEKMFTVEISP
GSQIAAQISHSVVLTCDVTGCESPSFSWRTQIDSPLNGKVRSEGSKSTLTLSPVRFENEH
SYLCTVTCGYKKLEKGIQVELYSFPRDPEIEMSGLLVSRNLVTVSCKVPDVYTFDLLEIE
LLKGESIMKNKIFLEDVSKKSLETKRLEMIFIPTTEDTGKVLVCLAKLPIDEMEFEPKQR
QSTQVLYVNVTPGDTTLLVSPSSILEEGRSVNMTCSSDGLPASKILWSRLLRIGDLQPLS
ENITLTLMSTKMEDSGIYVCEGINQVGISRKEVKLIIQVTPKDIQLTAFPSENVKEGDTV
IISCTCGNVPQTLIILKKKAELKSMDSAYTIHRAQLEDVGVYECESKNEVGLQLTRITLD
VKGRESNKDYFSPELLVLYGASSLIIPAIGMIIYFPRKANMKGSYSLVEAQKSKV
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggatcttgttagtctggggaatgaacactattacctgtgcacagtgatttgt
gagtctcagaaactggaagaaaaaatcccagtggagatctactctttccctaaggaccca
gagattcatttgagtggttccctggaagttgggaagccagtcacagtcacgtgtttggtc
cctgctgtgtacccatttgaaaagctggagatactattactgaagggcaaccgttccatg
aagacacagaactttctggagccttcagaaatgaagtcccaggaaacgaagagtttggaa
gtaaccttcactcctattgatgaggatattgggaaagctcttgtttgttaagctacagta
cacattaatgaaattgactctcaaccccaagtacaggagactnacaaaaaactgcaagtc
tatgtctcacccaaggacacagttatatctgtgaatccctccacaagcctgcaagaagat
gactccgtgatgatgacatgtaccagtgaaggtctaccagcgccacagattttccggagc
aagaaattagacattgggaatctacagctcctttctgagaatgcaactctcactttaatt
gctatgaggatggaagattctggaatttatgtgtgtgaaggagttaacctggttgggaaa
gacagaaaagaggtgaaattaattgttcaagagaaaatgtttactgtagagatctctcct
ggatcccagattgctgctcagattagccactcagttgtgttgacctgtgatgtcacgggt
tgcgagtccccatctttctcttggagaacccagatagacagccctctgaatgggaaggtg
aggagcgaggggtccaagtccacgttgaccctgagccctgtgagatttgaaaacgaacat
tcttacctgtgcaccgtgacatgtgggtataagaaactggaaaagggaatccaggtggag
ctctactccttccctagagatccagaaattgagatgagtggtctgttagtgagtagaaac
ctggtcactgtaagctgcaaggttcctgatgtgtatacttttgacctgctggagattgaa
ttacttaaaggggagagtattatgaaaaataaaatctttttggaagatgtaagtaagaaa
tccctagagacgaagagattggaaatgatcttcatacccaccactgaagatactggaaaa
gttcttgtttgtctggctaagttacctattgatgaaatggaatttgaacccaaacaaagg
cagagtacacaggtactatatgttaatgttactcctggggatacaaccctcttggtcagc
ccctcctccatcctggaggaaggtagatctgtgaatatgacatgctctagcgatggcctt
ccagcttcgaaaatcctgtggagcaggctgctacgtataggggatctacagcctctttct
gagaatatcactctcaccttaatgtctacaaaaatggaagattctggtatttatgtctgt
gaaggcattaaccaggttggaataagcagaaaagaagtaaaattaattatccaagttact
ccaaaagatatacagttaacagcttttccttctgagaatgtcaaggaaggagacactgtc
attatctcctgtacgtgtggaaatgttccccaaactttgataatcctgaagaaaaaagca
gagctaaagtctatggatagtgcatataccatccacagggcccagttagaggatgtggga
gtatatgaatgtgaatctaaaaatgaagttggcttgcaattaacaaggataacacttgat
gttaaaggaagagaaagtaacaaggactatttttctcctgaacttctcgtgctctatggt
gcatcctccttaataatacctgccattggaatgattatttactttcctagaaaagctaac
atgaaagggtcatacagtcttgtagaagcacagaaatcaaaagtgtag
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