Physeter catodon (sperm whale): 102982599
Help
Entry
102982599 CDS
T06011
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03440
Homologous recombination
pcad03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102982599 (BRIP1)
03460 Fanconi anemia pathway
102982599 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102982599 (BRIP1)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102982599 (BRIP1)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102982599 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
102982599 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
DUF6399
Motif
Other DBs
NCBI-GeneID:
102982599
NCBI-ProteinID:
XP_023983505
UniProt:
A0A2Y9ETR4
LinkDB
All DBs
Position
14:complement(101913849..102121788)
Genome browser
AA seq
1186 aa
AA seq
DB search
MMSSVCSEYTIGGVKINFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCS
ALAWQQSLSGKPVDEGLSKKAEVPLSCCCTCHSKNFTNNDVNQGTSYHFNSPSTPPSERN
GTLSTCQDSPEKTTLAAKLSAKKQASMYRDENDDFQVEKKRIRPLETTQQIRKRHCFEKE
VHHLDAKVASGKTIKLNSPLGKINSFSPQNPPGNCSRCCCSTKQGNSQDSSNTTKKDHGG
KSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCM
ELLDGKNGKFCYFYHGVHKISDQHILQTLQGMCKAWDIEEFVSLGKKLKACPYYTARELM
QDADIIFCPYNYLLDAQIRESMDINLKEQVVILDEAHNIEDCARESASYSVTEVQLRFAR
DELDSMVNNNIRKKDHEPLRAVCYSLINWLEANSEHLVERGYESSCKVWSGSEMLLNLHK
MGITAATFPILQGHFSTILQKEEKVSSVHGKEEAREVPIISASTQIMLKGLFMVLDYLFR
QNSRFADDYKVAIQQTYAWVNQTDTSDKNGFLVLPKNKKRLRQKTAVHVLNFWCLNPAVA
FSDINGKVWTIVLTSGTLSPMKSFSSELGVNFTIQLEANHVINNSQVWVGTIGSGPKGRN
LCATFQHTETFEFQDEVGALVLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGVWHNLEL
VKTVIVEPQRGEKTDFDELLQMYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAV
ITIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDW
GALILVDDRFRSNPSRYISGLSKWVRQLIQHHSTFESALESLAEFSKKHRKVIDVYKEDR
KSIQDNESTLAVACLKDNSSTCLLEAASHLPPEYPREDDPLLLEESAQAVGAEKIVISRS
TSPTFNKQTNRVSWSGSNFLEQYLTGKILTGTRKFRSSEDCASNSSTFKTEKGHEAVLPL
TDKYESSSLTINTSLGPCPQSETIVPSIKINAALLNPEDPDIQLSLVSEEAELSTSNTAF
ETEAEDESIYFTPELYDPIDTNEEKNELVGTDRDNRLANNSNCILAEDLFEIKTMKGVDS
VREMKAEDCTGTKLNSVMHIKESKVDDVGSNVKTTHINELELGKNS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcagtatgttctgagtatacaattggaggggtgaagattaactttccttgt
aaagcttatccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaag
cagcattgtttgttggagagccccacagggagtgggaaaagcttagccttactttgctct
gctttagcatggcaacaatctcttagtgggaagccagtggatgaaggcttaagtaaaaaa
gctgaagtaccattgtcgtgttgttgtacatgccattcaaagaattttacaaacaatgac
gtgaaccagggaacttcatatcatttcaacagtccaagtacaccaccttctgaaagaaat
ggcactttgtcaacttgtcaagactctcctgaaaaaactacactggctgcaaagctatct
gctaagaaacaggcatccatgtacagagatgaaaatgatgattttcaagtagagaagaaa
agaattcgacccttagaaactacacagcagattagaaaacgtcattgttttgagaaggag
gtgcaccatttggatgcaaaagttgcttcaggaaagaccataaaactcaactccccatta
ggaaagataaactccttttctccacaaaatccccctggtaactgttctaggtgctgttgt
tctactaaacaaggaaacagtcaagattcttcaaataccactaagaaggaccatgggggg
aaatccaagatacccaaaatatattttgggacacgcacacacaagcagattgctcagatt
actagagagctccggaggacagcatactcaggggtcccaatgactatcctttccagcagg
gatcacacttgtgtccatcctgaagtagtaggtaacttcaacagaaatgaaaaatgcatg
gaattgctagatggaaaaaatggaaaattctgctatttttatcatggtgttcataaaatt
agtgatcaacacatattacagactctccaagggatgtgcaaggcctgggatatagaagaa
ttcgtcagcttggggaaaaaactaaaggcatgtccatattacacagcacgagaactaatg
caggatgctgacataatattttgtccctacaactatcttctagatgcacaaataagggaa
agtatggatatcaatctgaaagaacaggttgtcattttagatgaagctcataacattgag
gactgtgctcgggaatcagcaagttacagtgtaacggaagttcagcttcggtttgctcgg
gatgaactagatagtatggttaacaataatataaggaagaaagaccatgaacccctacga
gctgtgtgctatagcctcattaattggttagaagcaaactctgaacatcttgtggaaagg
ggttatgaatcatcctgtaaagtatggagtggaagtgaaatgctcttaaatttacacaaa
atgggcataaccgctgctacttttcccattttgcagggacatttttctactatccttcaa
aaagaagaaaaagtctcatcagttcatggtaaagaggaggcaagagaagtacctattatt
agtgcttcaactcaaataatgctcaaaggactttttatggtgcttgactatctttttagg
caaaatagcagatttgcagatgattataaagtcgctattcaacagacttacgcttgggta
aatcagactgatacttcagataaaaatgggttcttggttctaccaaaaaataagaaacgt
ttacgacagaaaacagcagttcatgtgttgaatttttggtgcttaaatccagctgtggcc
ttttcagatattaatggcaaggtttggacgattgttttgacatctgggacattatcacca
atgaaatccttttcatcagaacttggtgttaattttactatccaactggaggctaatcat
gtcattaataactcacaggtttgggttggcaccattgggtcaggccccaagggtcgcaat
ctctgtgctaccttccagcacacggaaacatttgagttccaggatgaagtgggagcactt
gtgttatctgtgtgccagactgtgagccaaggaattttgtgtttcctgccatcttacaag
ttattagaaaagttaaaagaacgttggctctccactggtgtatggcataatctggagctg
gtgaagacagtcattgtagaaccacagagaggagaaaaaactgattttgatgaattactg
cagatgtactatgatgcgatcaagtacaaaggagaaaaagatggcgccctcctggtggca
gtttgtcgtggtaaagtgagtgagggtctggatttctcagatgacaacgcccgtgctgtc
ataacaataggaattccttttccaaatgtgaaagatctacaggttgaactaaagcgacag
tataatgaccagcattcaaaattaagaggtcttttaccaggtcgtcagtggtacgaaatt
caagcatacagggccttaaaccaggccctaggtaggtgtattcgacacaaaaatgattgg
ggagctcttattctagtggatgatcgcttcaggagtaacccaagtcgatacatatctgga
ctttctaagtgggttcggcagctgattcagcaccattcaacctttgagagtgcactggag
tccttggctgaattttccaaaaagcaccgaaaggtcattgatgtatacaaagaagacaga
aaatctatacaggacaatgagtctacgcttgcagtggcttgtttgaaggataatagctca
acttgtttattagaagcagcaagccatctaccaccagaatatcctagggaagatgatcca
ttattattggaagagtctgcccaggcagtaggagcagaaaaaattgtgatttccagatcc
acaagcccaaccttcaacaaacaaacaaacagagttagctggtctggcagtaattttctg
gaacagtatcttactggtaaaattctgactggaacacgtaagtttaggtcatcagaggac
tgtgcctctaattcttccactttcaaaacagaaaagggacatgaagcagttttgccactc
actgataaatatgagtcctcctctctgacaataaacacatcacttggaccgtgccctcaa
tcagaaaccattgttccatcaataaagattaatgctgctctcctgaatccagaagatcca
gacattcagttgtctctagtaagtgaagaagctgaactttctacttcaaatacagctttt
gaaacagaggcagaggatgaatctatctattttacacccgaactttatgatcccatagat
acaaatgaagaaaagaatgaactagttggaactgatagagacaacagattggctaataat
tcaaattgcattttagctgaagatctttttgaaattaaaactatgaaaggagtggattca
gtcagagaaatgaaagctgaggattgcacaggcacaaagttgaatagtgtcatgcatatt
aaagaaagtaaagttgatgacgttggtagtaatgtaaaaacgactcatataaatgaattg
gaactgggaaaaaactcatga
DBGET
integrated database retrieval system
