Physeter catodon (sperm whale): 102986727
Help
Entry
102986727 CDS
T06011
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X4
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03030
DNA replication
pcad03410
Base excision repair
pcad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102986727 (POLE)
03410 Base excision repair
102986727 (POLE)
03420 Nucleotide excision repair
102986727 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcad03032
]
102986727 (POLE)
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102986727 (POLE)
Enzymes [BR:
pcad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102986727 (POLE)
DNA replication proteins [BR:
pcad03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
102986727 (POLE)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
102986727 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
GARP
Motif
Other DBs
NCBI-GeneID:
102986727
NCBI-ProteinID:
XP_007126876
Ensembl:
ENSPCTG00005020575
UniProt:
A0A2Y9FMY1
LinkDB
All DBs
Position
19:complement(25705565..25762844)
Genome browser
AA seq
2236 aa
AA seq
DB search
MDLRFGFERLKEPGEKTGWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALPYKPY
FYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDL
VKVRKEISPAVKKNREQGHTSDAYTAMLTSVLQGGSVITDEEEASKKIADQLDNIVDMRE
YDVPYHIRLSIDLKIHVAHWYNVRYRGSAFPVEIARRDDLVERPDPVVLAFDIETTKLPL
KFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFYVFNAPDEVHL
IQRWFEHIQETKPNIMVTYNGDFFDWPFVEARAAVHGLSMYQEVGFQKDSQGEYKAPPCI
HMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDA
VATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEPE
FSKLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIE
EEEKVPMEQVTNFQEVCDQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPS
AMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLTPEGP
ARAFHELSREEQAKYEKRRLADYCRKAYKKIHVTKVEERLTTICQRENSFYVDTVRAFRD
RRYEFKGLHKVWRKKLSAAVEVGEAAEAKRCRNMEVLYDSLQLAHKCILNSFYGYVMRKG
ARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTSV
KKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVARSENSIFFEVDGPYLAMILP
ASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVY
GSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEF
LGDQMVRDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFD
IRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKI
SELFVLEGKRQVGVAQASEGAQSLGTPDMEDFGLVKPLRLAVPVATKRRRSRWESQEESQ
DLELTVPWQEILGQPPGLGTTQEEWLVWLQFHKKKWQLQARQRLAHKKRRRLEGAEGSPR
PGTIREGPSTGLGGFFRRTARSILDLPWQIVQISETSQAGLFRLWAVISSDLYCIKLNIP
RVFYVNQRVAKAEEGPSYRKVNRVLPRSNVVYNLYEYSVPEDMYQEHINEINTELAAPDI
EGVYETQVPLLFRALVQLGCVCVVNKQLVRHHSGWEAETFALEHLEMRSLAQFSYLEPGS
IRHIYLYHHAQGHKALFGIFVPAQRKASVFVLDTVRSNQMPSLSALYSAEHSLLLEKVGP
ELLPPSKHTFEVRAETDLKTICRAIQRFLLAYKEERRGPTLIAVQSNWELKRLAGEVPVL
EEFPLVPVRVADKVSYGVLDWQRHGARRMIRHYLNLDTCLSQAFEMSRYFHVPVGNLPED
ISTFGSDLFFARHLQRHNHLLWLSSTSRPDLGGKEADDNRLVMEFDDQAPVEINSSGCYS
TVCVELDIQNLAVNTILQSHHVNDMEGANSMGISFDVIQQASLEDMITGNQAVSALASYD
ETALCSSTFRILKSMVVGWVKEITQYRNIYADNQVMHFYRWLRSPSSLLHDPTLHRTLHS
MMKKLFLQLIAEFKRLGSSVVYANFNRIILCTKKRRVEDALAYVEYITNSIHSKEIFHSL
TISFSRCWEFLLWMDPSNYGGIKGNVPSSIHCGQQDSPEEGRVEGEEPEEEPEEGDTQEL
DVEDLLENNWNILQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRSAPGSTPVRRRGA
SQLSQEAQGEAGALPGMITFSQDYVANELTQNFFTITQKIQKKVTGSRNSTELSEMFPVL
PGSHLRLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRS
YVLPEVICRSCNFCRDLDLCKDPSFSQDGSVLPQWLCSNCQVAYDSSVIEMALVEALQKK
LMAFTLQDLICLKCRGVKETNMAMYCSCAGAFSLTIHTKVFMEQIRIFRNIAQHYGMSYL
METLEWLLQQNPQLGH
NT seq
6711 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcgatttggttttgagagactcaaggagcctggtgagaagacaggctggctt
atcaacatgcaccctacggagattttagatgaagataaacgcttagttagtgcagtggat
tactactttattcaagatgatgggagcagatttaaggtggccttgccctataagccatat
ttctacattgcaaccagaaagggttgtgagcgagaagtttcgtcttttctctctaagaag
tttcagggtaaaattgctaaagtagagactgtccctaaagaggatctggacttgccaaat
cacttggttggtttgaaacgaaattacattaagctgtccttcaacaccgtggaggacctt
gtcaaagtgaggaaggagatctcccctgctgtgaagaaaaaccgggagcagggccacacc
agtgatgcctatacggctatgctcaccagtgttctacaagggggcagtgtgattactgat
gaagaagaagcctctaagaagattgctgaccagttggacaacattgtggacatgcgagag
tacgatgtgccctaccacatccgcctctccattgacctgaagatccatgtggctcactgg
tacaatgtccggtaccgaggaagtgcctttccagtggaaattgcccgccgcgatgacctt
gttgaacgacccgaccctgtggttttagcatttgacattgagacgaccaaactgcccctc
aagtttcccgatgctgagactgatcagattatgatgatttcctatatgattgatggtcag
ggctacctcatcaccaacagggagatcgtctcagaagatatagaagatttcgagttcacc
cccaagccagaatatgaagggcccttctatgtcttcaatgcgcctgatgaggttcatctc
atccaaagatggttcgaacacatccaggagaccaaacccaacatcatggtcacctataat
ggggacttctttgactggccgtttgtggaggccagagcagcggtccatggactgagcatg
taccaggaggttgggttccagaaggacagccagggggagtacaaagcacccccgtgcatc
cacatggactgtctcaggtgggtgaagagggacagttaccttcctgtgggcagccacaac
ctcaaagcagctgccaaagccaagctgggctatgaccccgtggaactggaccccgaggac
atgtgccggatggccactgagcagccccagacgctggccacctactcggtgtcagatgca
gtggccacatactacctgtacatgaagtacgtccacccctttatattcgccctgtgcacc
attatccccatggagcccgatgaggtgctgcggaagggctccgggacgctgtgtgaggcc
ttgctgatggtacaggccttccacgccaacatcatcttccccaacaagcaggagccagag
ttcagcaagctgacagatgatggccacgtgctggatgccgagacctacgtgggcggccac
gtggaagccctggagtcgggcgtgttccgcagcgatatcccctgccggttccggatgaat
cctgctgcttttgacttcctgctgcagcgggtggagaagaccatgcgtcacgccatcgag
gaagaggagaaggtgcccatggagcaggtcaccaacttccaagaggtgtgtgatcagatt
aagaccaagctcacctccctgaaagatgttcctaaccgaattgagtgtccccttatctac
cacctggacgtgggggccatgtaccccaacatcatcttgacgaaccgcctgcagccctcc
gctatggtggatgaggccacctgtgctgcctgtgacttcaacaagcctggagcaaactgc
cagaggaagatggcctggcagtggaggggcgagttcatgccagccagccgcagcgagtat
catcggatccagcaccagctggagtcagagaagtttcctcccttgaccccagagggccca
gcccgggcctttcacgagctgtcccgcgaggagcaggctaaatacgagaagcggaggctg
gcagattactgccggaaggcatacaagaaaatccacgtgaccaaggtggaagaacgtctc
accaccatctgccagcgggagaactccttctacgtggacacggtgcgtgcctttcgggac
aggcgctacgagttcaaaggtctccacaaggtgtggagaaagaagctctctgcggcagtg
gaggtgggagaggcagcggaagcaaagcgctgcaggaacatggaggtcctgtacgactcc
ctgcagctggctcacaagtgcatcctcaactccttctatggctacgtcatgcgcaaaggg
gcccgctggtactccatggagatggctggcatcgtctgcttcacgggggccaacattatc
acccaggcacgggagctgattgagcagatcgggaggcccttagagctggacacagatgga
atatggtgtgtcctgcccaacagcttcccggaaaactttgtcatcaagacgaccagtgtg
aaaaagcccaaggtgaccatctcctaccctggggctatgttaaacatcatggtcaaggaa
ggcttcaccaatgaccagtaccaggagctggccgagccctcctcactcacctatgtcgcc
cgctcggagaacagcatcttttttgaggttgacggaccctaccttgccatgatccttcca
gcctccaaggaagaaggcaagaaactgaagaagaggtatgccgtattcaacgaggatggt
tccctggctgagctcaagggtttcgaggtcaagcgccgtggggagctgcagctgattaaa
atcttccagtcctcggtattcgaggccttccttaagggcagcaccctagaggaggtgtat
ggctctgttgccaaggtggctgattactggctggacgtgctgtatagcaaggcagctaac
atgcctgattctgagctgttcgagctgatctctgagaaccgttccatgtctcggaagctg
gaagattatggggagcaaaagtctacgtccatcagcacggccaagcgcctggctgagttc
ctgggagaccagatggtgagggatgcagggctgagctgccgctacatcatctcccggaag
cctgaggggtctccggtcacagagagggccattccactcgccattttccaggcagagccc
acggtgaggaagcactttctccggaaatggcttaagagttcttcccttcaagactttgat
attcggacaattctggactgggactactacatcgagcgactgggaagtgccatacagaag
atcatcacaatccctgcggccctgcagcaggtgaagaacccagtaccacgtgtcaagcac
cctgactggctgcacaaaaaactgctggagaagaatgatgtctacaagcagaagaagatc
agtgagctctttgtccttgagggcaagagacaggtgggcgtggcacaagcttcagaaggt
gcccagagccttggcacccccgacatggaggacttcggccttgtgaagccgctccgcttg
gcagtgcccgttgctaccaagaggaggcgtagccgctgggagagccaggaggagtcgcag
gacctggagctgacggtgccctggcaggagatcttggggcagcctccggggcttggaacc
acccaggaagagtggctggtctggctccagttccacaagaagaagtggcagctacaagct
cgacagcgccttgctcacaagaagaggcggcgtctggagggggcagaaggttcaccaagg
cctgggaccatccgagaggggccctccacagggctggggggcttctttcgaagaactgct
cgcagcattctggaccttccgtggcagattgtgcaaatcagcgagaccagccaggctggc
ttattcaggctgtgggctgtcatcagcagtgacctatattgcatcaagctgaacattccc
cgggtattctacgtgaaccagcgggtggccaaagcggaagagggcccttcctatcggaag
gtgaatcgggtccttcctcgctccaacgtggtctacaatctctatgagtactcggtgcca
gaggacatgtaccaagagcacatcaacgagatcaacactgagctggcggcgccggacatc
gagggcgtgtatgagactcaggttccgttattgtttcgggccctggtgcagctcggctgt
gtgtgtgtggtcaataaacagttggtgaggcatcactcaggctgggaagcagaaaccttc
gctcttgagcacctggagatgcgctctctggcccagttcagctacctggaaccagggagc
atccgccacatctacctgtatcaccacgcgcagggccacaaagctctcttcggcatcttc
gtgcccgcacagcgcaaggcgtctgtgtttgtgttggataccgtgcgaagcaaccagatg
cccagcctcagtgccctgtactcagccgagcacagcctcctgctggagaaagtgggcccc
gagctcctgccccccagcaaacacacttttgaagttcgggctgaaacagacttgaagacc
atctgcagagccatccagcgcttcctgctggcctacaaagaggagcgccgtgggcccaca
ctcatcgctgttcagtccaactgggagctgaagaggctggctggcgaagttcccgtcttg
gaggaattcccgctagtgcccgtccgtgtggctgataaggtcagctacggggtcctggac
tggcagcgccacggagcccggcgcatgatccggcactacctcaacctggacacttgtctg
tcacaggccttcgagatgagcaggtacttccacgtccccgttgggaatctgccagaggac
atctctacctttggctccgacctcttctttgcccgccatctccagcgccacaaccacctg
ctctggctgtcttctacatcgcgccctgacctgggcgggaaggaggctgacgacaaccgc
ctcgtcatggagttcgatgaccaagcgcccgtggagatcaacagttcaggctgttactcc
acagtgtgcgtggagctggacattcagaacctggctgtcaacaccatcctgcaatctcac
cacgtcaatgacatggagggggccaacagcatgggcatcagcttcgatgtgatccagcag
gcctccctggaggacatgatcacgggcaatcaggctgtgagcgccctggccagctacgac
gagactgccctgtgctccagcaccttcaggatcctgaagagcatggtggtgggctgggtg
aaggagatcacgcagtaccgcaatatctacgccgacaaccaggtgatgcacttctaccgc
tggctccggtccccgtcctcgctgcttcacgaccccaccctgcaccgcacgctgcacagc
atgatgaagaagctcttcttgcagctcattgctgagttcaagcgcctggggtcatcagtc
gtctatgccaacttcaaccgcatcatcctatgcaccaagaagcggcgggtggaagatgcc
cttgcctacgtggagtacatcaccaacagcatccattctaaagagatcttccattctttg
acaatttctttctctcgatgctgggaatttcttctctggatggatccctctaactatggt
ggaatcaaaggaaatgttccatctagtattcactgtggacagcaagactcccctgaagag
ggcagagtagagggggaggagcctgaggaggagcctgaggagggagatacacaggagctg
gatgtcgaggacctgctggaaaacaactggaacattctgcagttcctgccgcaggcagcc
tcctgccagagctacttcctcatgatcgtttcagcgtacatcgtggccgtgtaccacagc
atgaaggaggagctgaggcgcagcgccccgggcagcacccccgtgaggaggaggggggcc
agccagctctcccaggaggcccagggggaggctggagcccttcccggaatgatcaccttc
tcacaagattatgtggctaacgaactcactcagaacttcttcaccatcacacagaagatt
cagaagaaagtcacaggctctcggaactcgactgagctctcagaaatgtttcctgtcctc
cccggttctcacctgcgtctcaataaccccgctctggagttcatcaaatatgtgtgcaag
gtcctgtctctggacacgaacatcacaaaccaggtgaacaagctaaaccgagacctgctt
cgcctggtagatgtcggcgagttctcggaggaggcccagttccgagacccctgccgctcc
tacgtgctccctgaggtcatctgccgcagctgtaacttctgccgggacctggacctgtgc
aaagacccctccttctctcaggatgggtctgtgctgcctcagtggctctgctccaactgt
caggtagcctacgactcatcagtcattgagatggccctggtggaagccctgcagaagaaa
ctgatggccttcaccctgcaggacctgatctgcctgaagtgccggggtgtgaaggagacc
aacatggccatgtactgtagctgtgccggggccttctccctcaccatccacaccaaggtc
ttcatggagcagatcagaatcttccggaacattgcccagcactatggcatgtcgtacctc
atggagaccctggagtggctgctgcagcagaacccccagctgggccattag
DBGET
integrated database retrieval system
