Physeter catodon (sperm whale): 102988038
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Entry
102988038 CDS
T06011
Symbol
SLC6A4
Name
(RefSeq) LOW QUALITY PROTEIN: sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04721
Synaptic vesicle cycle
pcad04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
102988038 (SLC6A4)
04721 Synaptic vesicle cycle
102988038 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcad02000
]
102988038 (SLC6A4)
Transporters [BR:
pcad02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102988038 (SLC6A4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
102988038
NCBI-ProteinID:
XP_023983382
Ensembl:
ENSPCTG00005007871
UniProt:
A0A2Y9T1I0
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Position
14:93654234..93687875
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AA seq
612 aa
AA seq
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MEKIVKEMVFYRRVSLPLGIGRSLAKSRTGTQQPSPGAEDTQHSIPAATTALVAEVHPGE
RETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYTIMAVFGGIPLFYMELA
LGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLISSFAAQLPWT
SCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYMRHVLQIHRSKGLQDLGGISWQLALC
IMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILLILLVRGATLPGAWRGVLFYLKPNWQ
KLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFV
IFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDS
TFAGLEGVITAVLDEFPHIWSKRREWFVLSVVITCFFGSLITLTFGGAYVVKLLEEFATG
PAVLTVALIEAIAVYWFYGINQFCSDVKEMLGFSPGWFWRICWVAISPLFLLFIICSFLM
SPPQLRLFQYNYPQWSIILGYCIGTSSFICIPMYITYRLIITPGTLKERLIKGITPETPT
EIPCGDIHLNAV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggagaagattgtcaaggaaatggtgttctacagaagggtgtccctgcccctggggata
gggcggagtctggccaaatctcgaacgggtactcagcagccaagccccggtgcagaagac
actcagcattccatcccggctgccaccaccgccttagtggctgaggttcatccaggggaa
cgggagacctggggcaagaaggtggatttcctcctctccgtcattggctacgctgtggac
ctgggcaacgtctggcgctttccctacatctgttaccagaatggagggggggcattcctc
ctcccctacactatcatggccgttttcggggggatcccgctcttctacatggagctcgcg
ctgggccagtaccaccgaaatggatgcatttcgatatggaggaaaatctgcccaattttc
aaagggatcggttacgccatctgcatcattgccttttacatcgcctcctactacaacacc
atcatggcctgggcgctctactacctcatctcctcttttgcggcccagctgccctggacc
agctgtaagaactcctggaacactggcaactgcaccaactacttctccgaggacaacatc
acctggacactccactcaacatcccctgcagaagaattttatatgcgccacgtcctgcag
atccaccggtcaaaggggctccaggacctggggggcatcagctggcagcttgccctctgc
atcatgctgatcttcactattatctactttagcatctggaaaggtgtcaaaacatctggc
aaggtggtttgggtaacagccaccttcccttacatcatccttttgatcctgctggtgagg
ggggccaccctccccggagcctggaggggagttctcttctatttgaaacccaactggcag
aaactcctggagacaggggtgtgggtggatgcggccgcccagatcttcttctctctcggt
cctggctttggggtcctgctggcttttgcgagctacaacaaattcaacaacaactgttac
caagatgccttggtgaccagtgtggtgaactgcatgacgagcttcgtttcaggatttgtc
atcttcacagtgctggggtatatggctgagatgaggaacgaagatgtgtctgaggtggcc
aaagatgcaggccccagcctgctcttcatcacatatgcggaagccatagccaacatgccg
gcatccacgttctttgccatcatcttcttcctgatgttaatcacactgggcttggacagc
acatttgcaggcttggagggggtgatcacagctgtgctggatgagtttccacatatctgg
tccaagcgccgggagtggtttgtgctcagcgtggtcattacctgcttctttggctccctg
atcaccctgacttttggaggggcctacgtggtgaagctgctggaggagtttgccacggga
cccgcagtgctcactgttgccctgatagaagcaattgctgtgtattggttctatggcatc
aatcagttctgcagtgatgtgaaggaaatgcttggtttcagccctggatggttttggagg
atctgctgggtagccatcagccccctgtttctcctgttcatcatttgcagttttttgatg
agcccaccacagctacgactttttcagtataattatcctcagtggagtatcatcctgggt
tactgcataggaacctcatctttcatctgcatcccgatgtatataacttatcggctgatc
atcactccagggacacttaaggagcgtcttattaaaggtatcactccagaaacaccgaca
gaaattccctgtggggatatccacttgaacgctgtgtaa
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