KEGG   Physeter catodon (sperm whale): 102994843
Entry
102994843         CDS       T06011                                 
Symbol
POLR2I
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9 isoform X1
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
pcad  Physeter catodon (sperm whale)
Pathway
pcad03020  RNA polymerase
pcad03420  Nucleotide excision repair
pcad05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102994843 (POLR2I)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102994843 (POLR2I)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    102994843 (POLR2I)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcad03021]
    102994843 (POLR2I)
   03400 DNA repair and recombination proteins [BR:pcad03400]
    102994843 (POLR2I)
Transcription machinery [BR:pcad03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     102994843 (POLR2I)
DNA repair and recombination proteins [BR:pcad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102994843 (POLR2I)
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom Ogr_Delta DZR
Other DBs
NCBI-GeneID: 102994843
NCBI-ProteinID: XP_007101160
Ensembl: ENSPCTG00005013573
UniProt: A0A2Y9EFE5
LinkDB
Position
Unknown
AA seq 125 aa
MEPDGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE
NT seq 378 nt   +upstreamnt  +downstreamnt
atggaacccgatgggacctacgagccgggcttcgtgggtattcgattctgccaggaatgt
aacaacatgctttaccccaaggaggacaaggagaaccgcattctgctgtacgcgtgccgg
aattgtgattaccagcaggaagccgacaacagctgcatctacgtcaacaaaatcacgcac
gaagtggacgaactgacccagatcatcgctgacgtgtcccaggaccccacgttaccgcgg
accgaagaccacccttgccaaaagtgcggccacaaggaggcggtgttcttccagtcacac
agtgcccgggccgaggatgccatgcgcttgtattacgtgtgcacggccccacactgtggc
caccgctggaccgagtga

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