Paraburkholderia caffeinilytica: DSC91_007103
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Entry
DSC91_007103 CDS
T06448
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcaf03009
]
DSC91_007103
Enzymes [BR:
pcaf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DSC91_007103
Ribosome biogenesis [BR:
pcaf03009
]
Prokaryotic type
ribosomal protein modification factors
DSC91_007103
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AXL53603
LinkDB
All DBs
Position
2:3987347..3988738
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AA seq
463 aa
AA seq
DB search
MSQTISPAVPTPSTPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTC
GFIDEAVQESLDAIGEALSENGKVIVTGCLGAKQSASGSNLIEEVHPKVLAVTGPHAVGE
VMQAVHNHLPKPHDPFIDLVPAAGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR
PVAEVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVGALGEL
AAQYGAWVRLHYVYPYPSVDEVIPMMAAGPFKGHVLPYLDVPFQHAHPEVLKRMKRPANA
EKVMERVKAWREMCPDLTIRSTFIAGFPGETEEQFQTLLDFIREAELDRVGCFAYSPVEG
ASANELDGALPDEVREERRARFMEVAEEVSARRIAKKVGKTLKVLVDEINADGGIGRTAA
DAPEIDGVVYIAPATKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaccatttccccagccgtgccgaccccttcgaccccgaaggtcggtttcgtc
agcctcggctgtcctaaagcgcttgtcgactccgagcagatcatcacgcagctgcgcgcc
gaaggctacgagatctccggcacttacgacggcgcggacctcgtcgtcgtcaacacttgc
ggcttcatcgacgaagcggtgcaggaaagcctcgacgcgatcggcgaagcgctcagcgaa
aacggcaaggtgatcgtcacgggctgcctcggcgccaagcagagcgcgagcggttcgaat
ctgatcgaagaagtgcatccgaaggtgctggccgtgaccggcccgcacgcggtcggcgaa
gtgatgcaggcggtgcacaatcatctgccgaagccgcacgatccgttcatcgacctggtg
ccggccgccggcgtgaagctcacgccgcgtcactacgcctacctcaagatttccgaaggc
tgcaatcaccgctgcacgttctgcatcatcccgtcgatgcgcggcgatctcgtgtcgcgc
ccggtcgccgaagtgatgctcgaggcggagaacctgttcaagtccggcgtgaaggaactg
ctggtgatttcgcaggacacgagcgcatacggcgtcgacgtcaaataccgcaccggtttc
tggaacggcaagccgatcaagacgcgcatgaccgatctggtcggcgcgctcggcgaactc
gcggcgcagtacggcgcctgggtgcgtttgcactacgtgtatccgtatccgagcgtcgat
gaagtcattccgatgatggcagcgggtccgttcaagggccatgtgctgccgtatctggat
gtgccgttccagcatgcgcatccggaagtgttgaagcgcatgaagcgtccggccaacgcc
gagaaggtgatggagcgcgtgaaggcgtggcgtgaaatgtgccccgatctgacgatccgc
agcacgttcatcgccggcttcccgggcgagactgaagagcaattccagacgctgctcgat
ttcatccgcgaggcggaactggatcgggtcggctgctttgcctattcgccggtcgaaggc
gcgagcgccaacgagctcgacggtgcgttgcccgacgaagtgcgtgaagaacgccgcgcg
cgtttcatggaagtcgccgaagaagtgtcggccagacggatcgcgaagaaggtcggcaag
acgctgaaagtgctggtcgacgagatcaacgccgacggtggcatcggccgcaccgcggcg
gatgcgcccgagatcgacggcgtcgtgtatatcgcgccggccaccaaggcgtcaaagcgt
tacaaggtcggcgatttcgtctcggtgaagatcaccggcgccgatggccacgacctgtgg
ggcgaggtctag
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