Phalacrocorax carbo (great cormorant): 104048902
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Entry
104048902 CDS
T08596
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao00310
Lysine degradation
pcao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104048902 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcao03000
]
104048902 (PRDM6)
03036 Chromosome and associated proteins [BR:
pcao03036
]
104048902 (PRDM6)
Enzymes [BR:
pcao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
104048902 (PRDM6)
Transcription factors [BR:
pcao03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104048902 (PRDM6)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104048902 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
zf-H2C2_2
SET
zf-C2H2_11
Zap1_zf1
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
104048902
NCBI-ProteinID:
XP_009507782
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MVAASSTILIVFFPLCPTGCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPEIPE
WLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLLPEKVQAGVIRNTQHLW
EIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTE
LLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMSRQDTLQPFNKSSKLSPATPQRSI
VFPQTPCSRNFSLLDKSGSIESGFNQISVKNQRVLASPTSTSQLNSEFSDWHLWKCGQCF
KTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFA
GATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggtggcagccagcagcaccatactgatagtgtttttccctctttgccccacaggatgt
gacatgtgtgctgataaccgcaatggcgagtgccccatgcacgggcccctccactccctg
cgccgtctggtgggcaccagcagtgctgctgcagcagcccctccacctgagatcccagag
tggctccgggacctgccccgggaagtctgcctgtgcaccagcacagtgcctggcctggcc
tacggcatttgtgcggcacagcggatccagcagggcacctggattgggccctttcaggga
gtcctgctcttgccagagaaggttcaagcaggagtcatcaggaacactcagcatctctgg
gaaatatatgaccaagatgggacactgcagcactttattgatggtggagaacccagtaag
tcaagctggatgaggtatatccgatgtgcaaggcactgcggggaacagaacttaacagtg
gttcagtacaggtcaaatatattctaccgggcttgtatagatatccccaggggcactgag
ctgttggtgtggtacaatgatagctacacatctttctttggaatccctctccagtgcatt
gcccaagatgaaaacttgaatgtcccttcgactgtaatggaggccatgtccagacaagac
accctacagccttttaataaaagtagcaaactatcccctgccactccacagcgatccata
gtatttccacagactccgtgtagcagaaatttttctctcctggataagtctgggtccatc
gagtcaggatttaaccagatcagtgtcaaaaaccaacgagttcttgcaagcccaacttca
acaagccaactaaattctgagttcagtgactggcatctttggaaatgtgggcaatgcttt
aagactttcacccagcggatcctcttacagatgcatgtgtgtacgcagaaccctgacagg
ccctaccagtgtggtcactgctcccagtctttctcccaaccttcagagctgaggaaccat
gtagttacgcactccagtgacaggcctttcaagtgtggctactgcggtcgtgcctttgct
ggtgccactacactcaacaatcacatccggacacacactggggaaaagcccttcaagtgc
gagaggtgtgagaggagcttcacacaagccacccagctgagtcgacaccagaggatgccc
aatgagtgcaagccaataacagagagcacagaatcaattgaagtggattaa
DBGET
integrated database retrieval system
