Phalacrocorax carbo (great cormorant): 104053716
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Entry
104053716 CDS
T08596
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04010
MAPK signaling pathway
pcao04210
Apoptosis
pcao04218
Cellular senescence
pcao04620
Toll-like receptor signaling pathway
pcao04621
NOD-like receptor signaling pathway
pcao04622
RIG-I-like receptor signaling pathway
pcao04623
Cytosolic DNA-sensing pathway
pcao04625
C-type lectin receptor signaling pathway
pcao04920
Adipocytokine signaling pathway
pcao05132
Salmonella infection
pcao05164
Influenza A
pcao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104053716 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104053716 (NFKB1)
04218 Cellular senescence
104053716 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104053716 (NFKB1)
04621 NOD-like receptor signaling pathway
104053716 (NFKB1)
04622 RIG-I-like receptor signaling pathway
104053716 (NFKB1)
04623 Cytosolic DNA-sensing pathway
104053716 (NFKB1)
04625 C-type lectin receptor signaling pathway
104053716 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
104053716 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104053716 (NFKB1)
05168 Herpes simplex virus 1 infection
104053716 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
104053716 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcao03000
]
104053716 (NFKB1)
Transcription factors [BR:
pcao03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
104053716 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
104053716
NCBI-ProteinID:
XP_009513483
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MAGEDSYIMGVSDPQMFAMDQLMGMNALFNTNYITSDLPLRTADGPYLQIIEQPKQRGFR
FRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVGK
FCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPELS
YLQADGCGDRQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVIS
DAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWEG
FGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDK
EEVQRKRQKLMPNFSDGYGGGSGAGGGGMYGGGGGGAGSGFSYPSYGYSAFGGMHFYPGT
TKSNTGMKHGLSDSTAEQDGKSSDKQSDKWDMKHDTEVEIAERNECRTSGDNEEKEDAAS
SCKTEVNEADCRWQDGLFLEKAMQLAKRHCNALFDFAVTGDVKMLLAVQRHLTAVQDDNG
DNVLHVAIIHLQTELVKKLLEVIPDMNYNDIINMRNNLYQTPLHLAVVTKQAEVVEDLLK
AGADVSLLDRHGNSVLHLAATEGDDKILSLLLKHKKVSPMVDLANGEGLGAIHMAVMANS
MSCLKQLIAAGVNVNAQEQKSGRTALHLAVEHKNIPLVCCLLLESDADVDSTTYDGTTPL
HIAAGRGSCKLTAVLKAAGANPHLENFEPLFDLDDVKDDEDDDEGIVPGTTPLDMAANCE
VYDILNGKPYEPPVVLEDLLTQGRLREMNESSKMQLYKLLEVPDPNKNWSTLAEKLGLGI
LNNAFRLSPSPAKTLLDNYEVSGGTVQELIAALRQMDHTEAIDIIQKALPVSQRPSHQED
NTVQALLSSSSPPTFANGETGELYNSKFQDNESTCDSGVETSFRKLSFTYSDSLNSKLSV
TLSKMTLGYGRESSVHSNYIAN
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaagattcctatattatgggagtgtctgatccccaaatgtttgcaatggat
cagttaatgggaatgaacgcattatttaatacaaattacatcacttcagatttaccacta
cgaacagcagatggaccatatcttcaaatcatagaacagccaaaacagagggggtttcgt
ttccgatatgtatgtgaagggccctcacatggtggacttcctggtgcttctagtgaaaag
aacaaaaaatcataccctcaggtcaaaatctgcaattatgttggacctgcaaaagtaatt
gtccagttagttactaatgggaagtacgtccacttgcatgctcacagcttggtgggtaaa
ttttgtgaagacggagtatgcacggttaatgcaggacctaaagatatggttgtagggttt
gcaaatcttggaatacttcatgtcacaaagaagaaagtgtttgaaactctggaaacacgc
atgatagatgcttgcaaaaagggatacaacccaggactcctggtgcatcctgaacttagc
tatctgcaggcagatggatgtggagacagacagctaactgaacgagaaagagaaattatt
cgtcaggcagcagtacagcagactaaagaaatggatctcagtgtggtgcgtcttatgttt
acagccttcctccctgacagtaatggtagtttcacacggaaacttgatcctgttatatca
gatgcaatatatgacagcaaagcgcccaacgcctcgaacttaaaaattgtgaggatggac
agaacagcagggtgcgtaacaggaggagaagagatttaccttctctgtgacaaggttcaa
aaagatgatattcaaatacgtttctatgaggaggatgagaatggaggtatgtgggaaggc
tttggagacttttctcctacagatgtacatagacagtttgctattgtgttcaaaacaccc
aagtatcgagatgtcaatatcacaaagccagcgtctgtatttgtacaactgcgtcggaaa
tctgatctagaaacaagcgaaccaaagccttttctctactacccagaaatcaaagataaa
gaagaagtgcaaaggaaaagacagaagctcatgccaaacttctctgatggctatggcgga
ggcagtggcgcaggaggtggtggcatgtatggagggggaggtggcggtgctggctctggg
ttcagttatccttcatatggatactctgcttttggagggatgcatttctaccctggcaca
acaaagtccaatactggaatgaaacacggactatcggatagcacagcagaacaagatggg
aagagctctgataaacaaagtgacaaatgggacatgaaacatgatacagaagtggaaatt
gcagagaggaatgagtgcagaacctctggtgacaatgaagagaaagaggatgctgcttct
tcctgtaaaactgaagtcaatgaagcagactgcaggtggcaggacggtctgttcctggag
aaggccatgcagcttgccaagcgtcactgcaatgctctctttgatttcgctgtaactgga
gacgtgaagatgctgttggctgttcagcgccatctcactgctgtccaggatgataacgga
gacaatgtccttcatgtagcaattatccaccttcagactgagctggtgaaaaaactcttg
gaagtgatacccgatatgaattataatgacatcattaacatgagaaacaacctttatcag
acccccttgcacctggcagtggtcacaaagcaggcagaggtggtagaagacttgctgaag
gctggagcagatgtcagccttctggatcgccacggcaattctgtcttacatttagctgct
accgaaggagacgacaagatcttgagtctactcctcaagcataagaaggtatctccgatg
gtcgaccttgccaatggtgaaggtctcggtgcaattcacatggcggtgatggcaaatagc
atgtcctgcctcaaacagctgatcgctgctggagttaacgtcaatgctcaggaacaaaaa
tctggacgaactgcactgcatttagcagttgagcacaagaacatccctttggtatgctgc
cttttgcttgagagtgatgcagatgtggacagcactacgtatgatgggacaactcctctt
cacatagcagctggaaggggctcttgcaaattgacagcagttctcaaagcagcaggtgca
aatcctcacttagagaactttgagccattgtttgatctagatgatgtgaaagacgatgaa
gatgacgatgaaggaattgtgcctggaacgacaccactggatatggcagccaactgtgag
gtgtatgacatactaaatggcaaaccctatgagccaccagtggttttggaggacttactg
acacaaggacgtttgagagagatgaatgaaagttccaagatgcagctttacaaactactg
gaagtgcccgatccaaacaaaaactggtccactctagcagaaaaactaggtcttggcata
cttaataatgccttcaggctgagcccctccccagcgaaaactctgctagataactatgag
gtttctggtggtacagttcaagagctgatcgctgctttgagacagatggatcacacagaa
gccattgacatcattcagaaagcactacccgtctcacaacgcccctctcaccaggaggac
aatacagtacaagctcttctgtcatcatcatcaccacccacctttgcaaatggagagaca
ggcgagctttataatagcaaatttcaagacaacgaaagcacgtgtgacagtggtgtggag
acctccttccgcaaactgagctttacttactcagactctctgaacagcaagttatcagta
acacttagcaaaatgaccctgggctatggacgtgagagttcagtgcacagcaattacata
gccaactag
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