Pseudoalteromonas carrageenovora: PC2016_0011
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Entry
PC2016_0011 CDS
T06565
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar00071
Fatty acid degradation
pcar00280
Valine, leucine and isoleucine degradation
pcar00310
Lysine degradation
pcar00362
Benzoate degradation
pcar00380
Tryptophan metabolism
pcar00410
beta-Alanine metabolism
pcar00640
Propanoate metabolism
pcar00650
Butanoate metabolism
pcar00907
Pinene, camphor and geraniol degradation
pcar00930
Caprolactam degradation
pcar01100
Metabolic pathways
pcar01110
Biosynthesis of secondary metabolites
pcar01120
Microbial metabolism in diverse environments
pcar01200
Carbon metabolism
pcar01212
Fatty acid metabolism
Module
pcar_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PC2016_0011
00650 Butanoate metabolism
PC2016_0011
09103 Lipid metabolism
00071 Fatty acid degradation
PC2016_0011
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PC2016_0011
00310 Lysine degradation
PC2016_0011
00380 Tryptophan metabolism
PC2016_0011
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PC2016_0011
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PC2016_0011
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PC2016_0011
00930 Caprolactam degradation
PC2016_0011
Enzymes [BR:
pcar01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PC2016_0011
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PC2016_0011
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PC2016_0011
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PC2016_0011
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QBJ70263
LinkDB
All DBs
Position
I:complement(12532..14691)
Genome browser
AA seq
719 aa
AA seq
DB search
MLYKSDSFEVSFLKENIAEFKFCVAGSVNTLSQKTLSDCAAALKELAANTDIKGMIFTSD
KDHFIIGADIFEFLPTFTKPEEELVTWIKNATDVFDAIEDLPFPTLSAINGMALGGGCEW
ALATDYRVASETAKMGLPEVKLGIMPGFGGTVRLPRIIGADNAMMWITSGAENRAADALK
VGAFDAVVSTDKLLESSVATLELAIAGKLDWQAKRNVKLQPLKLNRVEQGMSFAMAEGMV
MGKTKGHYPAPVMAVRTIKAAANCTRDEAMAIENANFAKLARTNEAAAQTGIFLNDQFIK
GKARKLAKHSDVEIKQAAVLGAGIMGGGIAYQSAYKGTPIIMKDIQQDALDLGMGEASKL
LGAKVKRGHMPMEKMLATLSKIKPTLNDADLQNANIIVEAVVENPKVKQAVLADLEKNMP
EGTVLTSNTSTICIDLLAEALDKPENFCGMHFFNPVPKMPLVEIIRGAKTSDKTINAVVD
YALKLGKSPIVVNDCPGFFVNRVLFPYFAGFSKLVVEGANFAKVDKVMENVFGWPMGPAY
LLDVVGIDTAYHCTGVMADGFPERMARAEKDPVTVFANEKRFGQKNKAGFYKYETDRRGR
LKKSSDATAVELLAPITDAPKEFDKQEIIDRCMIPMINEVLLCLQEGIVASPQEADMALV
YGVGFPPFRGGAFRYLDQTGLANFVASADKYAHLGAIYQVSEQTRKWAEEGRVFYKVEG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttatataaaagcgattcctttgaagttagcttccttaaggaaaacatcgccgagttt
aagttttgtgttgcaggttctgtaaacactctatctcaaaaaactctttcagattgcgcg
gcagcattaaaagaattagccgctaatactgatatcaaaggcatgatttttaccagtgat
aaagaccactttattattggtgccgacatcttcgaatttttacctacgtttactaaacca
gaagaagaattagtaacgtggatcaaaaacgcaaccgacgtttttgatgcaatcgaagat
ctaccattcccaacactaagcgctataaacggtatggcacttggcggtgggtgtgagtgg
gcacttgctaccgattatcgtgttgcaagcgaaacagctaaaatgggcctaccagaagtt
aaacttggcataatgcctggttttggaggcacagtgcgcttaccacgcatcattggcgcc
gataacgcaatgatgtggattacctcaggcgcagaaaaccgcgcagctgatgcccttaaa
gtaggtgcgtttgacgcggtagttagtactgacaaactactagagtcaagcgtagcaaca
cttgaattagcaattgctggcaagttagattggcaagcaaagcgcaacgtaaaactacag
ccacttaaattaaaccgcgttgagcaaggcatgagctttgctatggcagaaggtatggta
atgggtaaaaccaaaggccactatcctgcaccggttatggcagtacgtaccattaaagca
gcggcaaactgtactcgcgatgaagcaatggcaatcgaaaatgctaactttgcaaaactt
gcgcgcactaacgaagctgcagcacaaaccggtattttcttaaatgaccagttcattaaa
ggcaaagcacgcaaacttgctaagcacagcgatgttgaaattaaacaagccgctgtatta
ggcgcaggtattatgggcggcggtattgcataccagtcagcttataaaggcacaccaatc
ataatgaaagacatccagcaggatgcgctagatttaggtatgggcgaagcgtctaaacta
cttggtgcaaaagttaaacgcggccatatgccaatggaaaaaatgctggcaacgcttagc
aaaattaaaccaacgcttaacgatgccgacctacaaaatgccaacattattgttgaagcc
gtagtagaaaaccctaaagttaagcaagccgtattagctgatcttgaaaagaacatgcct
gaaggcactgtacttacatcaaacacatcgactatttgtatcgacttgcttgcagaagca
ctcgataaaccagaaaacttctgtggtatgcactttttcaatccagtgccaaaaatgccg
ttagtagaaattatccgtggtgcaaaaacttctgataaaacaattaatgcggtagttgat
tacgcccttaaacttggcaagtcacctatcgttgttaacgattgccctggcttttttgta
aaccgagttttattcccgtactttgcaggctttagcaaattagtggttgaaggcgctaac
tttgcaaaagtagataaagtaatggaaaacgtatttggctggccaatgggcccagcttac
ctacttgatgttgtaggtattgatacggcttaccattgtactggcgtaatggcagacggt
ttccctgagcgtatggcacgtgcagaaaaagatccggtaactgtttttgctaacgaaaaa
cgttttggtcaaaagaacaaagcgggcttctacaagtacgaaacagaccgccgtggtcgt
cttaaaaaatcaagcgatgcaacagcagttgagctactagcaccaattactgatgcacct
aaagaatttgataaacaagaaatcattgaccgttgtatgatcccaatgatcaacgaagta
ctactttgtttacaagaaggcattgttgcttctcctcaagaagctgatatggcccttgta
tacggcgttggtttccctccatttagaggcggcgcgttccgttacttagatcaaactggt
ttagctaactttgttgcatcagcagacaaatatgctcacctaggtgcgatttaccaagta
tcagagcaaactcgcaaatgggccgaagaaggtcgtgttttctataaggtggaaggttaa
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