Pseudomonas canavaninivorans: LOY40_01980
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Entry
LOY40_01980 CDS
T08625
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pcas
Pseudomonas canavaninivorans
Pathway
pcas00730
Thiamine metabolism
pcas01100
Metabolic pathways
pcas01240
Biosynthesis of cofactors
pcas04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LOY40_01980 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LOY40_01980 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcas03016
]
LOY40_01980 (thiI)
Enzymes [BR:
pcas01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LOY40_01980 (thiI)
Transfer RNA biogenesis [BR:
pcas03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LOY40_01980 (thiI)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
ADH_N_2
Motif
Other DBs
NCBI-ProteinID:
UVM72972
LinkDB
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Position
435066..436520
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AA seq
484 aa
AA seq
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MKLIVKVFPEITIKSRPVRMRFIRQLAKNIRAVLRDLDPAVVVNGVWDNLELETRVSEPK
LLKEMTERLSCMPGIAHFLQVDEYPLGDFDDILAKCMLHYGDALAGKIFSVRCKRAGKHP
FSSMDVERYVGSQLRRQCGAAGISLKDPQIEVRIEIRDQRLFVIHSQHDSIGGYPLGSLE
QTLVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNSHMGVILKRMMLRAATSIADRLHIDALVTGEAISQVSSQTL
PNLSVIDCVTEKLVLRPLIASHKQDIIDTANEIGTADFARHMPEYCGVISVNPKTAAKRG
RVEHEEKEFDMAVLERAIENARLVPIDRVIDELGQDIQIEEVGEALAGQIIIDIRHPDDA
EDDPLSVAGVEVQTMPFYAVNARFKELDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatcgtaaaagtcttccccgagatcaccatcaagagccgcccggtacggatg
cgtttcatccgccagttggccaagaacatccgtgccgtgctccgtgacctggacccggcc
gtggtggtgaacggcgtgtgggacaacctcgaactggaaacccgcgtcagcgaacccaag
ctgctgaaggaaatgaccgagcgcctgagctgcatgccaggcatcgcgcatttcctgcag
gtcgacgaatacccgctgggggacttcgacgacatcctcgccaaatgcatgctccattat
ggtgatgcgctggccggcaagatcttttcggttcgctgcaagcgcgccggcaagcacccg
ttcagttcgatggacgtggaacgttatgtcggcagccagttgcgccggcagtgcggcgcc
gccggtatttcgctgaaagacccgcagatcgaagtgcgcatcgaaattcgcgaccagcgg
ttgttcgtgatccacagccagcacgacagcatcggcggttacccgctgggttcgctggag
cagaccctggtgttgatgtccggtggtttcgactccaccgtcgccgcctaccagatcatg
cgtcgcggcctgatgagccatttctgcttcttcaatctcggcgggcgtgctcacgaattg
ggcgtaatggaagtggcgcacttcatctggaagaagtacggcagctcccaacgcgtgtta
tttgtgagcgtgccgttcgaagaagtcctgggcgagattctcggcaaagtcgataacagt
catatgggcgtcattttgaagcgtatgatgttgcgtgccgcgacgagcatcgccgaccgc
ctgcacatcgacgcgctggtgaccggcgaggcgatttcccaggtatcgagccagacgctg
ccgaacctgtcggtgatcgactgcgtgaccgagaaactcgtgctgcgtccgctgatcgcc
agccacaagcaggacatcatcgacacggccaacgagatcggcaccgctgattttgcccgg
cacatgccggagtattgcggggtcatctcggtcaatccgaagacggcggccaagcgcggt
cgcgtggaacacgaagagaaagaattcgacatggcggtactcgaacgcgcgatcgagaac
gccaggctggtaccgatcgatcgggtcatcgacgaattgggccaggacatccagattgaa
gaagtcggcgaagcgctggccggtcagatcatcatcgacatccgtcatccggacgatgct
gaagacgacccgctgagcgtcgccggcgtcgaggtacaaacgatgccgttctatgcagtg
aacgcgcgtttcaaggaactggaccctactcgccagtacctgctgtattgcgacaaaggc
gtgatgagtcgcctgcatgcccaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
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