Pseudomonas cavernae: D3880_19295
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Entry
D3880_19295 CDS
T08208
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcav03016
]
D3880_19295 (trmA)
Enzymes [BR:
pcav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
D3880_19295 (trmA)
Transfer RNA biogenesis [BR:
pcav03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
D3880_19295 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_12
Methyltransf_4
Cons_hypoth95
MTS
DUF993
DREV
RrnaAD
Methyltransf_15
Ubie_methyltran
PrmA
Motif
Other DBs
NCBI-ProteinID:
AYC34379
UniProt:
A0A385Z4Z1
LinkDB
All DBs
Position
4239105..4240193
Genome browser
AA seq
362 aa
AA seq
DB search
MSAPKIDPASYATQLAEKQQRLSELLAPFDAPAPELFDSPREHYRLRAEFRLWREGEQRH
YAMFEAGDKHRPILIDDFPIASTRINALMPRLKAAWQASATLSFKLFQVEFLTTLAGDAL
ITLCYHRPLDALWQAEAERLAEELDVSLVGRSRGQRLVIGRDHVIEKLEVAGRRFRYRQP
EGAFTQPNGVVCEKMLNWAFEALGQRDDDLLELYCGNGNFTLPLATRVRQVLATEISKTS
VNAALANLADNGVNNVSLVRLSAEELTEALNEVRPFRRLAGLDLKSYEFGSVFVDPPRAG
MDPDTCELTRRFQRILYISCNPETLAANIAQLHDTHRVSRCALFDQFPYTHHMEAGVLLE
RR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccccaagatcgaccccgccagctacgccacccaactcgccgaaaagcaacag
cgcctcagcgaactgctggcgcccttcgacgcgccggcccccgagctgttcgactcgccg
cgcgagcactaccgcctgcgcgccgagttccgtctgtggcgcgaaggcgagcagcgccac
tacgcgatgttcgaggcgggcgacaagcacaggccgatcctgatcgacgacttccccatc
gccagcacgcggatcaatgcgctgatgccgcgtctgaaggcggcctggcaggccagcgcg
accctcagcttcaagctgttccaggtcgagttcctcaccaccctggccggcgatgcgctg
atcaccctgtgctaccaccgcccgctcgatgcgctctggcaagccgaggccgagcgcctg
gccgaggagctggatgtcagcctggtcggccgttcgcgcggccaacgcctggtgatcggc
cgcgaccatgtcatcgagaagctggaagtggccggccgccgcttccgctaccgccagccg
gaaggcgccttcacccagcccaacggcgtggtctgcgagaagatgctcaactgggccttc
gaggcgctcggtcagcgcgatgacgacctgctcgagctgtactgcggcaacggcaacttc
accctgccgctggccacccgcgtgcgccaggtgctggccaccgagatcagcaagacctcg
gtcaacgccgcgctggccaacctggccgacaacggcgtcaacaacgtcagcctggtgcgt
ctgtccgccgaggaactgaccgaggcgctcaacgaggtgcggccgttccgccgcctggcc
ggcctcgacctcaagagctatgagttcggcagcgtgttcgtcgacccgccgcgcgccggc
atggacccggacacctgtgagctgacccggcgtttccagcgcatcctctacatctcctgc
aacccggagaccctggcggccaacatcgcccagttgcacgacacccaccgagtcagtcgc
tgcgcgctgttcgaccagttcccctatacccaccacatggaggcgggcgtcctgctggag
cgccgctaa
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integrated database retrieval system
