Pseudomonas carboxydohydrogena: AFIC_002968
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Entry
AFIC_002968 CDS
T08963
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AFIC_002968
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcax01007
]
AFIC_002968
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcax03016
]
AFIC_002968
Enzymes [BR:
pcax01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
AFIC_002968
Amino acid related enzymes [BR:
pcax01007
]
Aminoacyl-tRNA synthetase
Class I (A)
AFIC_002968
Transfer RNA biogenesis [BR:
pcax03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AFIC_002968
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Methyltransf_8
Motif
Other DBs
NCBI-ProteinID:
WEF51384
LinkDB
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Position
complement(3063326..3064975)
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AA seq
549 aa
AA seq
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MSETITRFEDLSASDLRAVAEQSNAWPFEQAKQIVARLKKKPKDEVLFETGYGPSGLPHI
GTFGEVARTSMVRHAFRVLTEDKIRTKLLAFSDDMDGLRKVPDNVPNKEMLEQDLGKPLT
KVRDPFGTHDSFGAHNNAELRRFLDHFGFDYEFASSTAYYTSGRFDATLLKMLENIDKVM
AIMLPSLREERAASYSPFLPICPRTGVVLQVPIVEHDKKAGTVSYDDPETKERVTVPVTG
GHCKLQWKPDWAMRWVALGVDYEMAGKDLIDSVKLSGQICRALGGTPPEGFNYELFLDDK
GQKISKSKGNGLTIDEWLRYASPESLSLFMYREPKAAKRLYFDVIPRNVDEYQQFLDGFS
RQDAKQRLGNPVWHIHAGQPQASEMPVTFQLLLTLVSSSNAENAETLWGFIGRYRPGVTP
QSHPKLDALVGYAINYYRDFVAPTKTFRQPTDGERAALQDLRDALSQLPADASAEDIQNV
VYEIGRREPFLDPVKKGKDGRPGVSLDWFNMLYQVLLGQEKGPRFGSFVAVYGLNNAVAM
IDAALARNA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagacgatcacgcgatttgaagacctgtcggcgagcgatctgcgtgcggttgcg
gagcaatccaatgcgtggccgttcgagcaggcgaaacagatcgtcgcgcgcctgaaaaag
aaaccgaaggacgaggtgctgttcgagaccggctacggcccctcgggcctgccgcatatc
ggcactttcggcgaggtcgcgcgcacctcgatggtgcgccatgcgttccgcgtgctgacc
gaggacaagatcaggacgaagctgctcgccttctccgacgacatggatggcctgcgcaag
gtgccggacaacgtgccgaacaaggagatgctggagcaggatctcggcaagccgctgacg
aaagtgcgcgatccgttcggcacccatgacagcttcggcgcgcataataatgcggagctg
cgtcgttttctcgatcacttcggcttcgattacgaatttgcgtcctcgaccgcatactac
acctcgggccggttcgacgcgacgctgctcaaaatgcttgagaacatcgacaaggtgatg
gcgatcatgctgccgtcgctgcgcgaggagcgcgccgcgagctattcgccgttcctgccg
atttgcccgcgcacaggcgtggtgttgcaggtgccgatcgtcgagcatgacaagaaggcc
ggcaccgtttcgtacgatgaccccgagaccaaggagcgcgtcaccgttccggttaccggc
gggcactgcaagctgcaatggaagccggactgggcgatgcgctgggtcgcgctcggcgtc
gattacgaaatggcgggcaaggacctgatcgattcggtgaaactgtcgggacagatctgc
cgcgcgctcggcggcacgccgccggaaggtttcaactacgaactgttcctcgacgacaag
ggccagaagatttccaagtcgaagggcaacggcctcaccatcgacgaatggctgcgttat
gcctcgccggaatcgctgtcgctgttcatgtatcgcgagccgaaggcggcgaagcggctt
tacttcgacgtgatcccgcgcaacgtcgacgagtatcagcaattcctcgacggcttttcg
cggcaggacgccaagcaacggctcggcaatcctgtgtggcacatccatgcgggccagccg
caggcctccgagatgccggtgacgttccagttgctgctgacgctggtgtcgtcgtccaac
gcggaaaacgccgaaacgctgtggggcttcatcggccgctaccggccgggcgtcacgccg
cagagccatcccaagctcgacgcgctggtcggctacgcgatcaattactatcgcgatttc
gtcgcgccgaccaaaaccttccgtcaaccgactgacggcgagcgcgcggcattgcaggat
ctgcgcgatgcgttgtcgcaactgcccgcggacgcttccgccgaagacatccagaatgtc
gtctacgagatcggccgccgtgagccgtttctcgatccggtgaagaagggcaaggacgga
cgtccgggcgtgtcgctcgactggttcaacatgctctatcaggtgctgctcgggcaggag
aagggtccgcgcttcggctcgttcgtcgcggtctatggtctcaataatgcggtggcgatg
atcgacgcggcgctcgcgcgcaacgcctga
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