KEGG   Plasmodium chabaudi: PCHAS_1140100
Entry
PCHAS_1140100     CDS       T01108                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pcb  Plasmodium chabaudi
Pathway
pcb03020  RNA polymerase
pcb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PCHAS_1140100
  09124 Replication and repair
   03420 Nucleotide excision repair
    PCHAS_1140100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcb03021]
    PCHAS_1140100
   03400 DNA repair and recombination proteins [BR:pcb03400]
    PCHAS_1140100
Transcription machinery [BR:pcb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PCHAS_1140100
  RNA polymerase III system
   RNA polymerase III
     PCHAS_1140100
  RNA polymerase I system
   RNA polymerase I
     PCHAS_1140100
DNA repair and recombination proteins [BR:pcb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PCHAS_1140100
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat FACT-Spt16_Nlob
Other DBs
NCBI-GeneID: 3493060
NCBI-ProteinID: XP_016654085
UniProt: A0A077TM56
LinkDB
Position
11:complement(1470400..1471777)
AA seq 205 aa
MEDPVTRFYKCRKTCCEMLEDRGYIITAREKLENFAAFKELFEENEKLRSRMTIITSHKN
DASNKIIVYFVDEVKKTGVKPLRELTEKMDEKSIQRAILVTQNTLTPFAKDAIKEAAPRH
IIENFLDTELLVNITKHELVPKHIPLTSDEKRNLLQRYKIKENKLPRIQDVDPVCRYFGL
SKGQVVKIIRPSETAGRYVTYRLVV
NT seq 618 nt   +upstreamnt  +downstreamnt
atggaagatccagttactcggttttataaatgccgaaaaacatgttgtgaaatgcttgaa
gatagaggatatataataacagccagagaaaaactcgaaaattttgctgcctttaaagaa
ttatttgaagaaaatgaaaaattacggtcaagaatgactataatcacaagtcacaaaaat
gatgcaagtaataaaataattgtttattttgttgatgaagttaaaaaaactggagttaaa
cctttaagagaattaactgaaaaaatggatgaaaaatcaatacaaagagcaattcttgta
acacaaaatactttaacaccttttgctaaagatgcaatcaaggaagccgccccaagacat
atcatcgaaaattttttggacaccgaattattggttaacataacaaagcacgaactagtt
ccaaaacatattcctctaacaagcgatgaaaaacgaaatttgctacaaagatacaagatt
aaagaaaataaacttcccagaattcaagatgttgatcctgtttgtcgatatttcggatta
tcaaagggacaagttgtcaaaataattaggccaagtgaaactgcaggaagatatgtcaca
tatagactcgtggtttaa

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