Mixta calida: C2E16_05665
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Entry
C2E16_05665 CDS
T05419
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pcd
Mixta calida
Pathway
pcd00730
Thiamine metabolism
pcd01100
Metabolic pathways
pcd01240
Biosynthesis of cofactors
pcd04122
Sulfur relay system
Module
pcd_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
C2E16_05665
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
C2E16_05665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcd03016
]
C2E16_05665
Enzymes [BR:
pcd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
C2E16_05665
Transfer RNA biogenesis [BR:
pcd03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
C2E16_05665
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AUY24448
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Position
1214737..1216185
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AA seq
482 aa
AA seq
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MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKDLDETLAVVRHWDHIEVRSKDESLR
ETFIDELTRIPGIHHVLAVEDRVWTDMHNIFEQAMAVNRERLEGKTFCVRVKRRGQHPFS
SQDVERYVGGGLNQHIASAQVNLSNPQVTVSLEIENDRLLLVTGRYEGLGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGRSHRVRFV
AINFEPVVAEILEKVDDGQMGVVLKRMMVRAASQIAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIINLARKIGTEDFARTMPEYCGVISKSPTVKAVKAKI
EAEEENFDFTVLDRVVQEATNVDIRTIAEQTQEEVTEVETVASFSANDALLDIRSLDEQE
DKPLKVDGIEVTSLPFYKLGTQFGDLDQSKTWLLYCDRGVMSRLQALYLHEQGFKNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgtttcccgaaatcaccatcaagagtcagtcggtgcgtttg
cgctttatcaaaatccttacggggaatattcgcaacgtattaaaagatcttgatgagacg
ctggctgtcgtgcgtcactgggaccacatcgaagtccgttctaaagatgaaagcctgcgt
gaaacctttattgatgagctgacgcgcattcccggcattcatcatgtcctggcggtggaa
gatcgcgtctggaccgatatgcataatatttttgaacaggcgatggcggtcaaccgcgag
cggctggaagggaaaaccttttgcgtacgcgtgaagcgtcgcgggcagcacccgttcagc
tcgcaggatgtggagcgttacgtcggcggcggcctgaatcagcatatcgccagcgcgcag
gtgaatctctcgaacccgcaggtcacggtgagtctggagatcgaaaacgatcgcctgctg
ttggtgaccggtcgctatgaaggattgggcggcttcccgatcggcacgcaggaagatgtg
ttgtcactgatttccggcggcttcgactcgggcgtttccagctatatgctgatgcgccgc
ggctgccgcgtacactactgcttctttaacctgggcggcgccgcgcatgagatcggcgtg
cgtcaggtggcgcactatctgtggaatcgttttggccgctcgcaccgcgtgcgtttcgtc
gctatcaatttcgagccggtagtcgcggagattctggaaaaggtagacgacggtcagatg
ggcgtggtgttgaagcgcatgatggtgcgcgccgcttcgcagatcgccgagcgctacggc
gtgcaggcgctggttaccggcgaagcgctgggccaggtttccagccagacgctgaccaac
ctgcgactgatcgataacgcctccgatacgctgattctgcgtccgctgatttcacacgac
aaagaacatatcatcaatctggcgcgtaagatcggtacggaagatttcgcccgcaccatg
ccggagtattgcggggtgatttccaaaagcccgacggtaaaagcggtgaaggcgaagatc
gaagcggaagaggaaaacttcgattttacggtactggatcgggtagtgcaggaggcgacc
aatgtcgatatccgcacgatcgccgagcagacgcaggaggaggtaaccgaagtagaaacc
gtcgcctctttctccgccaacgatgcgctgttggatattcgttcactggacgagcaggaa
gataagccgctgaaggtcgacggcattgaagtgacctcgctgccgttttataagctcggc
acccagtttggcgacctcgatcagagcaaaacctggctgctttactgcgatcgcggcgtg
atgagccgtttgcaggcgctctacctgcatgagcagggctttaagaatgtgaaggtctat
cgcccgtaa
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