Mixta calida: C2E16_20195
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Entry
C2E16_20195 CDS
T05419
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pcd
Mixta calida
Pathway
pcd00540
Lipopolysaccharide biosynthesis
pcd01100
Metabolic pathways
pcd01250
Biosynthesis of nucleotide sugars
Module
pcd_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C2E16_20195
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcd01005
]
C2E16_20195
Enzymes [BR:
pcd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
C2E16_20195
Lipopolysaccharide biosynthesis proteins [BR:
pcd01005
]
Core region
C2E16_20195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
ThiF
adh_short
NAD_binding_10
Ldh_1_N
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AUY26975
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Position
4249832..4250764
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKALNEQGITDILVVDNLKDGTKFVNLVDLDITDYMDKEDFIASV
MAGDDLGDIEAVFHEGACSATTEWDGKYMMDNNYQYSKELLHFCLEREIPFLYASSAATY
GGRNDNFIEERAYEQPLNVYGYSKMLFDHYVRQILPEANSQVCGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGENPKLFEGSDNFKRDFIHVSDVAAVNLWFWKNGVSGIFNCGTGRA
ESFQAVADAALAYHQKGQIEYIPFPDKLKGRYQAYTKADLTKLRAAGYDKPFKTVAEGVA
DYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtgactggcggcgccggcatgatcggcagcaatattgtcaaagctctgaat
gaacaaggcattaccgatatcctggtggtggacaacctgaaagatggcaccaagttcgtc
aatctggtcgatctcgacatcaccgattacatggataaagaagacttcatcgccagcgtg
atggcgggcgacgatctgggcgatattgaagcggtgtttcatgaaggcgcctgctccgca
acgacggagtgggacggcaagtacatgatggacaataactatcagtactccaaagagctg
ctgcatttctgccttgagcgcgaaatcccgttcctgtacgcctcttccgccgccacctac
ggcggacgcaacgataacttcatcgaagaacgcgcctacgagcagccgctgaacgtttac
ggctactcaaaaatgctgttcgatcactatgtgcgtcagatactgccggaagcgaactcg
caggtgtgcggcttccgctatttcaacgtttatggaccgcgggaaggtcataaaggcagc
atggcgagcgtcgctttccatctgaacacgcagctgaataacggcgagaaccctaagcta
tttgaaggcagcgataacttcaaacgcgacttcatccacgtcagcgacgtcgcggcggtc
aacctgtggttctggaaaaacggcgtttccggcatcttcaactgcggcaccggccgtgcg
gaatctttccaggcggtagcggatgcggcgctggcttatcatcagaaaggtcagatcgaa
tacattccgttcccggataagctgaaaggccgctaccaggcttataccaaagcggatctc
accaaactgcgcgccgcaggctacgacaaaccgtttaaaaccgtggccgaaggcgtggct
gattatatggcctggctgaaccgcgacgcataa
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