Pediococcus claussenii: PECL_216
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Entry
PECL_216 CDS
T01713
Symbol
rpoE
Name
(GenBank) putative DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pce
Pediococcus claussenii
Pathway
pce03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PECL_216 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pce03021
]
PECL_216 (rpoE)
03400 DNA repair and recombination proteins [BR:
pce03400
]
PECL_216 (rpoE)
Transcription machinery [BR:
pce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PECL_216 (rpoE)
DNA repair and recombination proteins [BR:
pce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PECL_216 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
FPV060
Motif
Other DBs
NCBI-ProteinID:
AEV94539
UniProt:
G8PAA0
LinkDB
All DBs
Position
214197..214751
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AA seq
184 aa
AA seq
DB search
MRQLKLEIFEGQKKDELSLIEVAHAILANNGEPMAFVDLANAVQNYLSKSDEDFRNHLSQ
FYTDLNVDGSFISLGENTWGLRTWYPFDSIDEAVNHSDEDEDEDRPRPKKRKRVNAFLAD
ASNDDDVIDYDADDPEDEDDTPLDQQDDDNDDDYESVHDDSETLPDGIEGQLSEMGDDDD
DDDE
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccagttgaaactagaaatttttgaaggtcaaaaaaaagacgaattatctttaatt
gaagtagcacatgctatcttagctaataatggcgaaccaatggcgttcgttgatttagcg
aatgctgttcaaaattatttgagtaagtctgatgaagattttagaaatcatttatcacag
ttttatactgatttaaatgttgatggtagtttcatttcactcggtgagaacacttgggga
cttagaacttggtatccatttgattcgattgatgaagctgttaatcatagtgatgaagac
gaagatgaagaccgtccaaggcctaaaaaacgtaaacgcgttaacgcctttttggcggat
gcttcaaatgatgacgatgtaattgattatgatgctgacgatccagaagacgaagatgac
acgccacttgaccagcaagatgatgataacgatgacgactacgaaagcgtccatgatgat
agtgaaacattaccagatggtattgaaggtcaattatctgaaatgggtgatgacgacgat
gacgatgatgaataa
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