Polaribacter cellanae: J3359_04925
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Entry
J3359_04925 CDS
T08224
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcea
Polaribacter cellanae
Brite
KEGG Orthology (KO) [BR:
pcea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcea03009
]
J3359_04925 (rimO)
Enzymes [BR:
pcea01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
J3359_04925 (rimO)
Ribosome biogenesis [BR:
pcea03009
]
Prokaryotic type
ribosomal protein modification factors
J3359_04925 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TMF_TATA_bd
TRAM
Motif
Other DBs
NCBI-ProteinID:
QTE23624
UniProt:
A0A975H835
LinkDB
All DBs
Position
complement(1065339..1066691)
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AA seq
450 aa
AA seq
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MRTKTIKKNKINVVTLGCSKNIYDSEVLMGQLKANGKNVVHEDENDDGNIVVINTCGFIG
KAKEESIDTILHYANRKEAGEIDKVFVSGCLSERYKPDLEEQIPNVDQYFGTHDLPNLLK
VLEADYKHELIGERLTTTPKHYAYLKIAEGCDRPCSFCAIPLMRGKHVSTPIEDIVTEAT
KLAEKGIKEIMLIAQDLTYYGLDIYKKRALADLLEALAKVDGIEWIRMHYAFPTGFPMDV
LEVMKREPKVCNYLDIPLQHINTELLKSMKRGTTHEKTTALIRKFREAVPEMAIRTTLIV
GYPGETEEMFQELKDWVEEMRFERLGAFEYSHEENTGAYVLEDDVPADVKFKRVNEIMEV
QSQISWELNQEKIGKTFRCLFDRKDGEYFYGRTESDSPDVDNDVLVDAKEHYIKIGEFID
VKIHDAGDYDLYGTPVKKQEKPVPLNQRKK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaaaccatcaaaaaaaataaaattaacgttgttactttaggttgttctaaa
aacatttacgactcggaagtgttaatggggcagttgaaagccaatggtaaaaacgtggtg
catgaagatgaaaatgatgatggaaatattgttgtgattaatacttgtggttttatcgga
aaagcaaaagaagaatctattgatacgattttacactatgccaacagaaaagaagcagga
gaaatcgataaagtttttgtttcaggatgtttaagtgagcgttacaaaccagatttggaa
gagcaaatacccaatgtagaccaatattttggtacacacgatttgccgaatttattaaag
gttttagaagcagattataagcacgaattaataggcgaacgtttaacaaccactccaaaa
cattacgcatatttaaaaattgcagaaggttgtgatagaccttgttcgttttgtgcgatt
cctttaatgagaggaaaacacgtttctacacctattgaagatattgttacagaagcaaca
aaattagcagaaaaaggcattaaagaaattatgttaatcgcacaagatttaacatattac
ggattagatatttacaaaaaacgcgctttggcagatttgttagaagctttggcaaaagta
gatggaattgaatggattcgtatgcattatgcatttccaacaggttttccaatggatgtt
ttagaagtaatgaaacgcgaaccaaaagtgtgtaattatttagatattcctttacaacac
attaatacagagttgttaaagtcgatgaaacgaggaacaacacacgaaaaaacaacggct
ttaatccgtaaatttagagaagcagttccagaaatggcaattagaactacgttaattgtt
ggttacccgggtgaaactgaagaaatgtttcaagaattaaaagattgggtagaagaaatg
cgtttcgaacgtttgggagcttttgaatattcgcacgaagaaaatactggcgcttatgtt
ttagaagacgatgttcctgcagatgtaaagtttaaacgtgtaaatgaaattatggaagtt
cagtctcaaatttcttgggaattaaaccaagaaaaaataggaaaaacttttagatgtttg
ttcgatagaaaagacggagaatatttctacggaagaacagaatcggattctccagatgta
gataatgatgttttggtagatgctaaagaacactacattaagattggagaatttattgat
gtgaaaattcacgatgctggagattacgatttgtatggaacgcctgttaaaaagcaagaa
aaaccagttcctttaaatcaaaggaaaaaataa
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