Polistes canadensis: 106787939
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Entry
106787939 CDS
T05611
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pcf
Polistes canadensis
Pathway
pcf03440
Homologous recombination
pcf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106787939
03460 Fanconi anemia pathway
106787939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcf03400
]
106787939
Enzymes [BR:
pcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
106787939
DNA repair and recombination proteins [BR:
pcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
106787939
FA (Fanconi anemia) pathway
Downstream FA components
106787939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
ABC_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
106787939
NCBI-ProteinID:
XP_014606214
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MDSSKFQIEKENISINLCKNSFSEDFASQSNETYTDRCASPEHLIKNDPSKSTKDKDLPK
EMTDIILEESSIQESMPGTSSDIYYDFTQRSTIKKQIKKTSIYKPSEETCTENVEHNKEV
SKIRAKSPTFHTTGFRSASKKPKVCKANPQRKFKNGKDRMDSFKFQMEKEIEFIDLCEDS
FNKDSASQSEETYNHSSFLEQINKDGLTTSTPTKSISSAFTLSTFNLPAAWKNYKDQCIL
LNEMNNEYLIAGVKVTFPVEPYDAQKSVMRIVIKNCTNSTNCLIESPTGSGKTLALLCST
LAWQIRFVEDIERAFDDLMRQSQTVGKEKDDNKNECCGQDNKGSSTSDPTNLTSTNKLNE
PYYESMINLCDVFSDKEGKYKTIPKIFYTTRTHRQIKQVVKELGRTVYKNTKMTILSSRE
HTCIQDVPGNKTEHCYNLLDPEKPSECHYYNSTNKKDLSNFTQLKSTGISMPFDIEDLVE
VGRTNNLCPYFASKNLLEDAEIIFCPYNYIIDPEIRDIMQINLKNHVVLFDEGHNIEEIC
RQVAGAKFTTVELEFIIENCNGLLLQQFIDYAERDAYNTIKHYITILNEFINQTPLSCSQ
NGMAMTSTIWTGNQLIGLLEMNDIGLQEITKLSSATRFVIDEFNKAKEGVHKSKSKKIKL
TISRTTKILLHRLTLALKTIGTQEYENDYKAYIDESLCSDLADKESWILSQMVGKRLRTF
RLICLNSAIIFGPLAREARSIILASGTLTPTESFESELGTKFSDIHCTNHVISKDRVFVK
CVPRGPGGTLLKANFTNVNTWQFQDELGQLIVNIIETVPHGVLCFFSSYIMMNNQINRWK
VTNIWKLIQKYKKIFVEPREGSNLKDIMTQYREVINETSEINVDNKEGHSGAILFAVFRG
KVSEGIDFSDNEARCVVTVGIPYPVKNNKDVQMKWEYNDKNTSRGLLKGSDWYNIQAFRA
YNQALGRCIRHKNDWGAILLVDERFLMQSYQSSLPKWTRNSLQKNSKGENIMEELKVFVR
SKKTLLLEDVN
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcgaaattccaaatagaaaaggaaaatatttctataaatttgtgcaagaat
tctttcagcgaagactttgcttcgcaaagcaacgaaacatatactgaccgctgtgcatct
ccagaacatcttatcaaaaatgatccaagcaaaagtactaaagataaagacttaccaaaa
gagatgacagatatcattttggaagagtcatcgatacaagaaagcatgcctggtacaagt
agtgatatatactatgattttactcaacgctctaccattaaaaaacaaataaaaaaaact
agcatatacaagccttctgaagaaacctgcacagaaaatgttgaacataataaagaagta
agtaaaattagagccaaatctccaacctttcatactaccggatttagatcagcatcaaaa
aagcccaaagtatgtaaagcaaatccgcaaaggaaatttaaaaatggtaaagatagaatg
gattcatttaaattccaaatggaaaaagaaattgaatttatagatttatgcgaagactct
tttaacaaagattctgcttcgcaaagcgaagaaacatataatcatagttcatttctagaa
cagattaataaagatggtttgacaacatccactccaacaaaatctatttcctcagcattc
actctatcaacattcaatttacctgctgcttggaaaaattacaaagatcaatgcatatta
ttaaatgaaatgaataatgagtatctcattgccggtgttaaagtgacctttcccgttgag
ccatatgatgctcaaaaatctgttatgagaatagtcattaaaaattgcacgaattcgact
aattgtttgattgaaagtcctaccggaagcgggaaaaccttagctcttctttgcagcaca
ttggcttggcaaatcagatttgttgaggatattgaaagggctttcgatgacctcatgcgt
caatcacaaacagttggtaaggagaaagatgataataagaatgaatgttgtggacaagat
aacaaaggttcttctacgtccgatccaacaaaccttacgagtactaacaaattaaatgaa
ccttattacgaaagtatgattaacttgtgcgatgtttttagcgataaagagggaaaatac
aaaacgataccaaaaattttttatacgaccagaacgcatcgtcaaataaaacaagtcgtg
aaggaacttggtagaaccgtctataaaaatactaaaatgactatattaagtagtcgtgag
catacttgcattcaagatgttcctggaaataaaactgagcattgctataatctactagat
ccggaaaagccatctgagtgtcactattacaacagtacgaataaaaaggatttatcaaat
tttactcaattgaaatctacaggaatttcgatgccgttcgatatagaagatttagttgaa
gtcggtagaacgaataatctatgtccatattttgcatctaaaaatttacttgaagatgca
gaaataattttttgtccatacaattatatcattgatccagaaattcgggatatcatgcaa
atcaatttaaaaaatcatgtggtcttattcgatgagggtcataatatcgaagaaatctgt
cggcaagttgctggtgccaaatttacaacagtcgaactagaatttatcatagaaaattgc
aatgggttacttcttcaacaattcattgattatgctgaacgtgacgcctataataccatc
aaacactatataacaatactcaacgagttcataaatcaaactcctctctcctgttcgcaa
aatggtatggcaatgaccagtactatctggacgggtaaccaattaataggattattggaa
atgaacgacattggtttgcaagaaatcacgaaactatcatcggctacacgatttgtaata
gatgaatttaataaagcgaaagaaggcgttcataagtctaaatcgaagaaaataaaatta
acaatttcacggacaacaaaaatccttcttcaccgtctgaccctcgctttaaagacaata
ggaacgcaagagtatgaaaatgattataaagcttatatagacgaatcgctctgttcggat
ctagctgacaaagaaagttggatactatcacaaatggtaggaaaacgtttaagaacattt
aggttgatttgtttgaactcggctatcatatttggccctttggcacgagaggccagatca
attattttagcatcaggtaccttaaccccaacggaatcttttgaaagtgaacttggaacc
aaattttccgatatccattgtaccaatcacgttatcagcaaagatcgggtgtttgtaaaa
tgcgtgccaaggggaccaggtggaacgcttctaaaggctaactttaccaatgtgaatact
tggcaattccaggatgagctagggcaattaatagttaatatcattgaaactgtacctcat
ggagtattatgttttttttcatcatatataatgatgaataaccaaatcaatagatggaaa
gttactaatatttggaaactcattcaaaaatataaaaagatctttgtggaacctcgggag
ggctctaatctaaaagatataatgacacaatatcgagaagtaataaacgaaacctctgaa
ataaatgttgataataaggaaggccattcaggtgccattttatttgccgtatttcgtggc
aaagtttccgaaggtatcgactttagcgataatgaggcgcgttgcgttgttacggtcggg
atcccttatcctgtaaaaaataacaaggatgtccaaatgaagtgggagtacaatgacaag
aacacttcgagaggactacttaaaggttccgactggtataatatccaagcttttagggct
tacaaccaagcgttaggtcgatgcattcggcacaaaaatgattggggtgccattttattg
gtagacgaaaggtttctaatgcaatcataccagagtagtttacccaaatggacacgtaat
tcgctacaaaaaaatagtaaaggtgaaaatattatggaggaattaaaagtttttgtccgg
tcgaaaaagacgctattattggaagatgtgaattaa
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