Pseudomonas chlororaphis PA23: EY04_21980
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Entry
EY04_21980 CDS
T03201
Name
(GenBank) FAD-dependent cmnm(5)s(2)U34 oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pch03016
]
EY04_21980
Enzymes [BR:
pch01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
EY04_21980
Transfer RNA biogenesis [BR:
pch03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
EY04_21980
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Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
GIDA
FAD_binding_2
FAD_binding_3
Pyr_redox
Pyr_redox_2
FAD_oxidored
3HCDH_N
HI0933_like
Methyltransf_24
Shikimate_DH
ThiF
Pyr_redox_3
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AIC21482
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All DBs
Position
4895245..4897239
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AA seq
664 aa
AA seq
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MSHTQPHAQSHAQLDWDDQGRPRSRVFDDVYFSTDSGLDETRHVFLEQNRLRERFAALPP
SGRFVIGETGFGTGLNFLCAWQLFEQQANPSARLHFVSVEKFPLTPADLQRALALWPELA
PLAERLLRAYVAVHQGFQRLVLDEGRVTLTLLIGDALEQLPQLDGQVDAWFLDGFAPAKN
PEMWTAELFAELARLAAPGSSISTFTSTGWVRRLLNAAGFKMKRTPGIGHKWEVLRGEFL
GWPEDTPLPAASKPWFARPTQRIQDKHALVIGAGLAGCASAASLAARGWRVSLLERHGQL
AQEASGNPQGVLYLKLSAHGTALSQMILSGFGYTRRLLEQLQRGVDWDSCGVLQLAFNAK
EAERQAQLAAAFPTDLLHQLDQPQAQAQAGIGLAHGGLFYPEGGWVHPPALCQWQAAHPR
IRLLPHHDVLELRRVDGQWQAWDGERLLASAEVVILAGAAEIKRFPPSAELPLKRIRGQI
TRLPQTARSQDLATVVCAEGYVAPARLGEHTLGASFDFKSEDLTPTAAEHAGNLQMLEEI
SQDLVERLEADRLQTETLEGRAAFRCTSPDYLPIVGPLADQAAFAEVYAVLGKDARQVPD
LPCPWLDGLYINSGHGSRGLITAPLSGELLAAWLDNEPLPLPRSVAEACHPNRFALRRLI
RGKP
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
ctgtcccacacccagccccatgcccagtcccatgcccaactcgactgggacgaccagggc
cgcccgcgttcgcgggttttcgacgacgtgtatttctccaccgactcgggcctggatgaa
acccgccatgtgtttctcgaacagaaccgcctgcgcgagcgttttgccgcgttgccgccc
agtggccgcttcgtcatcggcgagaccggcttcggcaccggcctgaatttcctctgcgcc
tggcagttgttcgagcaacaggccaaccccagcgcacgcctgcatttcgtcagtgtggaa
aaattcccgctgacgccagccgacctgcagcgcgccctggccctgtggccggagctggcg
cccctggccgagcgcctgttgcgcgcctatgtcgccgtgcatcagggctttcaacgcctg
gtgctggacgagggccgcgttaccctgaccctgctgatcggcgatgccctggagcagttg
ccgcaactcgacgggcaggtcgacgcctggttcctcgatggcttcgccccggcgaaaaac
cccgagatgtggaccgccgagctgttcgccgaactggcgcgcctggccgctccgggttcg
agcatcagcaccttcaccagcaccggctgggtgcgccgcctgctgaatgccgcgggcttc
aagatgaaacgcaccccgggcattggccacaagtgggaagtgctgcgcggcgagtttctc
ggctggcccgaagacacgccgctgcctgccgccagcaaaccctggttcgcccgccccact
caacggatccaggacaaacacgccctggtgatcggcgccggcctggccggttgcgccagc
gccgccagcctcgccgcgcggggttggcgggtcagcctgctggagcgccacgggcaactg
gcccaggaagcctcgggcaacccgcagggcgtgctgtacctgaaactctcggcccacggc
accgccctgtcgcagatgattctcagcggtttcggctacacccggcgcctgctcgaacag
ctgcaacggggtgtcgactgggacagctgcggcgtgctgcaactggccttcaacgccaag
gaagccgagcgtcaggcgcagttggcagccgccttcccgacggacctgttgcatcagctg
gaccagccccaggcccaggcccaggccggcatcggcctggcccacggcgggctgttctac
ccggaaggcggctgggtgcacccgccggccctgtgccaatggcaagccgcgcacccacgg
attcgcctgctgccccatcacgatgtactggaattgcgccgggtcgatggccagtggcag
gcctgggacggcgagcggctgctggccagtgccgaggtggtgatcctcgccggcgccgcc
gagatcaagcgcttcccgcccagcgccgagctgccgctcaagcgcatccgcgggcagatc
acccgcctgccgcagaccgcgcgcagccaggacctggccacggtggtgtgcgccgaaggc
tatgtcgcccccgcgcgcctgggcgaacacaccctgggcgccagtttcgacttcaagagc
gaagacctgacgcccaccgccgccgagcatgcgggcaacctgcagatgctcgaagagatc
tcccaggacctggtggaacgcctggaggccgaccggctgcaaacggaaaccctcgaagga
cgggctgccttccgttgcaccagcccggactatctgccgatcgtcggtcccctggcggac
caggcggcgttcgccgaggtctacgcggtgctgggcaaggatgcgcgccaggtcccggac
ctgccctgcccctggctggacggcctgtatatcaacagcggccatggctcgcgcgggttg
atcaccgcgccgctgtcgggcgagttgctggccgcctggctggacaacgaaccgctgccc
ctgccgcgcagcgtggccgaagcctgtcaccccaatcgctttgccttgcgtcggttgatt
cgcggcaagccatga
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