KEGG   Pochonia chlamydosporia: VFPPC_02594
Entry
VFPPC_02594       CDS       T09407                                 
Name
(RefSeq) DNA-directed RNA polymerase, subunit K/RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03020  RNA polymerase
pchm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VFPPC_02594
  09124 Replication and repair
   03420 Nucleotide excision repair
    VFPPC_02594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pchm03021]
    VFPPC_02594
   03400 DNA repair and recombination proteins [BR:pchm03400]
    VFPPC_02594
Transcription machinery [BR:pchm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     VFPPC_02594
  RNA polymerase III system
   RNA polymerase III
     VFPPC_02594
  RNA polymerase I system
   RNA polymerase I
     VFPPC_02594
DNA repair and recombination proteins [BR:pchm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      VFPPC_02594
SSDB
Motif
Pfam: RNA_pol_Rpb6 Pox_RNA_Pol_19
Other DBs
NCBI-GeneID: 28846211
NCBI-ProteinID: XP_018146597
UniProt: A0A179FXZ9
LinkDB
Position
2:1478741..1479370
AA seq 153 aa
MSDFGDDDVGVGGDEPMLEDEEVTEYYDPEVGEDEDAEQGENGDDADNVIVSGDPSAAAN
ALKSSEKSLKDKKIPEAERTTTPYMTKYERARILGTRALQISMNAPVLVDLEGETDPLQI
AIKELREKKIPLIVRRYLPDGYYEDWTCEELLQ
NT seq 462 nt   +upstreamnt  +downstreamnt
atgtctgattttggcgacgatgacgtcggtgttggcggcgacgagcctatgctcgaggac
gaggaggtcaccgagtactacgatcccgaggttggagaagacgaggatgccgagcaagga
gagaatggcgacgacgcggataatgtcattgtttctggagacccctctgcggctgccaat
gccctcaagagcagtgagaagtcgttgaaggacaagaagattcccgaggccgaacggacg
actaccccctacatgaccaagtatgaacgagcgcgtattttgggcacccgcgctctgcag
attagcatgaatgcgcccgtgttggtagatcttgaaggcgagaccgacccgctccagatt
gcgatcaaggagcttcgcgagaagaagattcccttgattgttaggcgatatctgcctgat
ggctactacgaggactggacgtgcgaggaactgctgcaataa

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