Pochonia chlamydosporia: VFPPC_04224
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Entry
VFPPC_04224 CDS
T09407
Name
(RefSeq) DNA-directed RNA polymerase I polypeptide 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VFPPC_04224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_04224
Enzymes [BR:
pchm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VFPPC_04224
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
VFPPC_04224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Rpr2
Motif
Other DBs
NCBI-GeneID:
28847603
NCBI-ProteinID:
XP_018144743
UniProt:
A0A179FS33
LinkDB
All DBs
Position
3:1057573..1061328
Genome browser
AA seq
1231 aa
AA seq
DB search
MAPSATNTKWDHQYDTLRRQNLFQNPPKDHSAYPALQLAVNPHIESFNGMFRDDGKKGLL
AHGVADIGTKTFLDGDDRTGPEGKNRLHIRIKDVSLHKPQVPPSNKMARNREVLPAECRE
RHVTYRGRLSATFEYTVNGGDPVEFVRELGQVPIMIKSNRCHLENNSPAQLVQRKEESEE
LGGYFIVNGIEKVIRLLQVNKRNFPMAINRPSFQNRGLGYTPYGIILRSVRPDETSQTNA
LHYLNDGGVTFRFSWRKNEYLIPVVMILKALVETNDREIFEGLIGPMGSKATENTFLTDR
VELLLRTYKGYGLYSKSQTRAHLGEKFRVVLGVPESMSDYEVGTEFLRRIVLVHLGNINV
TEEQDADKFKMLLFMTRKLYALAAGECAVDNPDALQNQEILLGGFLYSQILKERLDEFLS
VGVRTSLRDFLRRHPEVSFTSEDFRKEFPTAIFRKANENLGNALEYFLSTGNLQSPSGLD
LQQTAGFTVVAEKLNFLRFISHFRMVHRGAFFAQLKTTAVRKLLPESWGFMCPVHTPDGS
PCGLLNHLAHKCKIMTDHVDVSKIPALAKELGVVDASSALTSENVVVMMDGKILGWCSPK
ESLRIADCLRYWKVEGTHGVPLQLEIGYVPASNGGSYPGVYITSTPARMVRPVKYLPLQR
QDFVGPYEQPYMSIAVVPQEIENGLSTHVEFDPTNMLSILANMTPFSDFNQSPRNMYQCQ
MGKQTMGTPGTAIRYRTDNKSYRIQTGQTPIVRAPLHNDYGFDNFPNGMNAVVAVISYTG
YDMDDAMILNKSAHERGFGHGTIYKTKKISLKDDSRTRATKSVTKAFGFAPHSYVSASHQ
GMLDDDGLPHVGRLVQEGDVICAWHTVTPDYNGNLVNLDGITHYEKYKDSETGFVEEVRL
IGAETGNEPLQTISLKFRVPRSPIIGDKFSSRHGQKGVASQKWPAIDMPFSESGIQPDVI
INPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFKFDEENTAADYFGHQLMKAGYNYH
GNEPMYSGITGEELGADIYIGVVYYQRLRHMVNDKYQVRTTGPVVPTTGQPIQGRKRGGG
IRVGEMERDALLAHGTAFLLQDRLLNCSDYTKSWICRRCGSFLSVQPTVSQFAPSKKKAP
SMVRCRNCATKLDETDGIDLTEIQGEIWEDGQGNYWVGGDETTQVVVPGALKYLDVELAA
MGVKLKYKINKGDEPRKGVMRPMGRPKAIKA
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggctccctcggcgacaaatacaaaatgggatcaccaatacgacaccctgcgacgtcaa
aatctcttccagaacccgcccaaagaccattctgcatatcccgctcttcaattagccgtc
aaccctcacatcgaatccttcaatggcatgttccgagatgacggaaagaaaggacttctc
gcccacggagtggcagacattggaacaaaaacttttctcgatggtgatgatagaactggt
ccagaaggcaaaaaccgactgcatattcgaatcaaggacgtgagcttgcacaagccacag
gttcctccttcaaacaagatggcgcgaaaccgtgaagtcctacccgccgagtgcagagaa
cggcacgtcacatataggggtcggctttctgccacgtttgaatatacagtcaatgggggt
gatcctgttgagtttgttcgagaattggggcaggtacccatcatgataaagtcaaatcga
tgccacttagaaaacaactcgcctgctcagctggtgcaacgaaaggaggaatccgaagag
ctcggcggctacttcatcgtcaacggcattgaaaaggtgatcagattactacaagtgaac
aagcgaaatttcccgatggctatcaatcgacctagcttccaaaaccgaggcttgggatac
accccgtacggtatcattttgcgatccgttcgccccgatgagacctcccagaccaacgca
cttcattaccttaatgacggcggcgtcactttccgattttcatggcgaaagaatgagtac
ttgattcctgtcgttatgatcctcaaggctttggtggagacaaatgatcgtgaaattttc
gaaggactgattggacccatgggatcaaaggcaacggagaataccttcttgacggatcga
gtcgagttacttctgcgaacctacaagggttatggactctacagcaaatcacagacccga
gctcacctcggagaaaagtttcgagtcgtgctaggtgtgccggaaagcatgtcagactac
gaagttggtactgagtttttgagacgcattgttctggttcacttgggcaacatcaacgta
actgaggaacaggatgccgacaagtttaagatgctgttgtttatgacccgcaaattgtat
gcactggccgctggcgaatgtgctgttgacaatcctgatgctcttcaaaaccaggagatt
cttctgggtggcttcttgtacagccaaattctaaaggagcgacttgatgaattcctgagt
gttggtgtccgcacatctcttcgcgatttcctcaggcgacatcccgaagtctcctttacg
tcagaagatttcagaaaggagttcccaactgcgattttcagaaaggcaaatgaaaatctt
ggcaatgcgcttgaatactttttatctactggaaacttgcaaagcccgtcaggattggac
ctgcaacagactgctggttttacggttgtggctgagaagctcaacttccttcgattcatc
agccatttccgcatggtccatcgtggtgcctttttcgctcaattgaagacgacggcagtg
cgaaaactgctcccggagtcatggggattcatgtgtcccgttcacacgcccgatggttcg
ccctgtggcctgttgaatcacttggctcacaagtgtaagattatgacggatcacgttgac
gtgtccaagattccggcgcttgccaaggagcttggtgtagtggacgcgtcttctgctctt
acgagcgagaatgtcgtcgttatgatggacggcaagattctcgggtggtgcagtccgaag
gagtcacttagaatagcagactgcctgcggtactggaaagtcgagggtactcatggcgta
ccattgcaactagagattggatatgtgcccgcatcgaatggaggttcataccccggtgtc
tacattacatcgactcctgcacgcatggtccgacccgtcaagtatctccctctgcaaagg
caagactttgtcggaccgtatgagcagccatacatgtccattgctgttgtcccgcaagag
atagaaaacggcttgtccacccacgtcgagttcgatcccaccaacatgctgtccatcctg
gctaacatgacgccattttccgatttcaaccagtctccccgtaacatgtaccaatgtcag
atgggtaaacaaaccatgggcacacctggcacagcaatacggtaccgaacagacaacaag
tcgtacagaattcagactgggcagactccaattgtccgcgcaccgttacacaatgactac
gggttcgacaacttccccaatggtatgaatgccgtcgttgctgtcatctcttacactggc
tatgacatggacgacgctatgatcttgaacaagtcagcacacgaaagaggcttcggacac
ggtaccatttacaagaccaagaagatttcactcaaggacgattcaagaacgcgtgcaaca
aagagcgtgaccaaggcctttggattcgcacctcacagctacgtcagcgcttcacaccaa
ggcatgcttgatgacgacggtcttcctcatgtaggacgtctggttcaagaaggagacgtc
atatgcgcatggcacaccgtcacgcccgactacaacggcaacctcgtcaacctggacggc
atcacccattacgaaaagtacaaagacagcgagacaggtttcgtcgaagaagtccggctc
attggtgcggagacgggcaatgaacccctgcaaaccatctccctcaagttccgtgtccca
cgatcccccatcatcggagacaagttctcgtctcgtcacggtcaaaagggtgttgcgtca
caaaaatggcccgccatcgatatgcccttctcggagagcggtatccaaccggacgtcatt
atcaacccgcacgctttcccgtcgcgtatgacgattggcatgtttgtcgagtccctcgcc
ggcaaggccggtgccctccacggccttgcccaagactcaaccccgttcaagtttgacgaa
gaaaacacggcggccgactactttggccaccagctcatgaaggccgggtacaactaccat
ggcaacgaacccatgtactccggcatcacgggcgaagagctcggcgccgacatctacatt
ggtgtcgtctactaccagcgtctgcgtcacatggtcaacgacaagtaccaagtgcgaact
actggtcccgtcgtccccacgaccggccagcccatccagggcagaaagcgcggtggtggt
atccgtgttggtgaaatggagcgtgacgcgctgctcgcccacggaacagccttcctcctt
caagacagactgctcaactgctccgattacaccaagtcgtggatctgccggcgctgcggg
tcatttttgtcggtacaaccgacggtttcgcagttcgcccccagtaagaagaaggcgccg
tctatggtgcggtgtcgaaactgtgccacgaagctggatgagacggatggaattgacctc
acggagattcagggcgagatttgggaagatggccagggtaattactgggttggcggtgac
gagacgacgcaggttgttgtgcctggagcgttgaagtacctggatgttgaattggcagcc
atgggagtcaagttgaagtataagattaacaagggggatgagcctaggaagggggttatg
cggccgatggggaggccaaaagctatcaaggcgtag
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