Pochonia chlamydosporia: VFPPC_13169
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Entry
VFPPC_13169 CDS
T09407
Name
(RefSeq) DNA-directed RNA polymerase II polypeptide
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VFPPC_13169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_13169
Enzymes [BR:
pchm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VFPPC_13169
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
VFPPC_13169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
AF_2299-like_N
Motif
Other DBs
NCBI-GeneID:
28854940
NCBI-ProteinID:
XP_018150382
UniProt:
A0A179GAX8
LinkDB
All DBs
Position
1:complement(6973960..6977641)
Genome browser
AA seq
1157 aa
AA seq
DB search
MSLVDDGFEALLEPFYNGKKLTDPVNTKDDKFQLLPAFLKVKGLVKQHIDSYNFFVEQEI
KDIVRANRTIRSDVDSNFWLEFTDIRVDRPRRQDHNDAKSRTEVTPMECRLRDMTYAAPI
VVDIAYIRDKRRIIRRDVPLGRMPVMLKSSKCRLGGANNAQMEAMNECPLDPGGYFIING
TEKVILIQEQLSKNRVIVEADEKNNVISASVTSSTHERKSKTYVTLKKDRIVMTHNVLVE
GIPIVIILKALGGLTDYEIMQLVAGSDGRYQDEFVINFDEATRAGVFTQHQALEYIGSRV
KMGSRRAMFGPQVRRNNVEEGLDALANLIIAHVPIEGLDFYPKAIYVAMMTRRVLMASQD
SKLVDDRDFVGNKRLELAGQLLSLLFEDLFKRFMGEVKMSIDKFLKKNNRAVPLDAVHMI
SNHANNIGMGINRAIQTGNWSVKRFNMNRAGVTHVLSRLSYISALGMMTRISSQFEKTRK
VSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTNVDEAPVKRWIFTLDTGVEP
IRNFSGAEMHREGSYIIHVNGTPFALTRYPKRFASRFRTMRRRGWISPFVSINLNSHFNA
VHIATDEGRICRPYIIVKNGKQKLTADHLKLLHLGKVTFDDFLTRGIVEYLDVNEEQDAL
VTIYENQITQSTTHLEIEPFTLLGAVAGLIPFPHHNQSPRNTYQCAMGKQAIGAIAYNQF
NRIDTLLYTLVYPQRPMVITKTIQLVHYDKLPAGQNATVVVMSYSGYDIEDALVLNKASI
DRGFGRCQVFRKYTTELQKYPNGRRERIGDPVNQVNGSTTRREEKYEALDDDGLATVGYR
VKSGEVMVKKETPLDLTTTGIGLDRGPSEYRDSAISYRIPDPAYIDKVMISQTEKDTTVI
KVQTRQTRRPELGDKFSSRHGQKGVVGIIVDQEDMPFADNGLCPDIIMNPHGFPSRMTVG
KLLECLTGKASVIDGRPDYGFGDAFRSHPVKDMSQVLLDYGFSWEGKDYFTSGLTGEPLE
AYIFNGPIYYQRLKHMVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYG
ASQLLLERLMLSSDGVTLDICQQCGLFGYKGYCNTCKSTREVTQMQMPYAAKLLVQELIS
MNVGVRLQLEDEFPHPQ
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggtggacgacggcttcgaggcccttttggagccattctacaatggcaagaag
cttaccgatccggtaaacaccaaggacgacaagttccagcttttgcccgcctttctcaaa
gtaaaggggcttgtaaaacagcacatcgactcatacaactttttcgtcgaacaagagatc
aaggacattgtccgagcgaaccgcaccattcgaagcgatgtcgacagcaatttttggcta
gagttcacagatatccgcgtcgatcgacctcgtcgccaagatcacaatgatgctaagtct
cgaactgaggtcacccctatggagtgtcgactgcgagacatgacatatgccgctcccatt
gtcgttgatatcgcatacattcgagataagcgccgaattatacggagagacgtgcctctg
ggtcgtatgccagtcatgttaaagagctccaagtgtcgattgggcggtgccaacaacgcc
caaatggaggccatgaatgaatgccctcttgaccctggcggttacttcattatcaatggc
acggaaaaagtcatattgatccaggagcagctgagcaaaaatcgagtcattgtcgaagcc
gacgaaaagaacaacgtcatatctgcttcagtgacgagttcgacccacgaacgaaagtca
aagacatatgttaccttgaaaaaggacagaattgttatgacacacaacgtcctggttgaa
ggcatccccattgtaattattctcaaggctctgggagggttgactgactacgaaatcatg
caactggtcgctggttcagatggtcgatatcaggacgagtttgttatcaattttgatgag
gcaaccagagctggtgtcttcacacaacatcaggctttagaatacatcggctcaagggtc
aagatggggtcgcgtagggccatgtttggaccgcaggttcgccggaacaatgttgaagaa
ggccttgacgcccttgccaacctcattatcgctcatgttcccatcgagggcttggatttc
tatcctaaagctatttacgtggcaatgatgacacgacgagtcctgatggcatcgcaggat
tccaagttggttgatgatagggattttgttggtaataagcggttggaattggcaggccaa
ctcctctctcttctctttgaggatttgttcaagcgattcatgggcgaggtcaagatgtct
attgacaagtttctcaagaaaaacaatcgcgcagttcccctcgatgctgttcatatgatc
agcaaccacgcgaacaatattggcatgggaatcaaccgtgcaattcaaacaggtaattgg
agtgtgaagcgattcaacatgaatcgagcgggtgtcacgcacgtgctcagccggctcagt
tacatcagtgccttgggaatgatgacccgaatcagctctcagttcgaaaagacgcgaaag
gtctctggcccgcgtgctctgcagccatcacagtggggtatgctttgtccttcagacact
cccgaaggtgaagcctgcggtctggtgaagaatttggcgctcatgacgcatattacgacc
aatgtggacgaggcacctgtgaagcgatggatatttacactggatacgggtgtcgagccc
atccgaaacttttcaggcgccgaaatgcaccgtgagggctcatatatcattcatgtgaat
ggtacaccatttgcccttacacggtatcccaagcgatttgcctcaagattccgcaccatg
cgtcgaaggggctggatctcaccattcgtcagcattaacttgaacagccattttaatgcc
gtccacattgcgacagatgaaggtcgcatctgccgaccgtacattattgtcaagaacggg
aagcaaaagcttacagctgatcatctcaagttgttacaccttgggaaggttacattcgac
gactttttgacacgaggtatcgtcgaatacctcgacgtcaatgaggaacaagatgccctg
gttactatttatgaaaatcaaataacacaaagcacaacacacttagagattgagccattc
actctccttggagccgtggccgggttgatcccatttccacatcataatcaatctcctaga
aacacatatcaatgtgctatgggtaaacaagctattggagcaattgcatacaatcagttt
aaccgcattgatacactgctttatactctcgtttacccacaacgcccgatggttatcacc
aagaccattcagcttgtgcattacgacaagcttccagctggacaaaatgccacggtcgtc
gtcatgtcgtactctggatacgatattgaggatgccctggtcttgaacaaggcttcaata
gacaggggatttgggcgttgccaggtcttccgcaagtacaccacggagttgcagaagtat
cccaatggtcgaagggagcgaattggagacccagtcaatcaggtcaatggcagcacgacc
cgtcgagaggagaaatatgaagctttggacgatgatgggttggccactgtcggctatcga
gtcaagagtggagaggtcatggttaaaaaagaaacgccattagacctcactacgacggga
attggtcttgatcgcggaccaagcgaataccgtgactctgccatctcgtaccgaatacct
gatcctgcctacattgacaaggttatgatctcacaaacagaaaaggatacgactgtgatc
aaggttcaaacgcgacaaactcgccgaccagaattgggtgacaaattctcctctcgccat
ggtcagaagggtgtcgttggtatcattgtggatcaggaagacatgccctttgcagataat
ggcctttgccctgacatcatcatgaacccccacggcttcccgtcccgaatgacggtaggc
aagttgctagaatgcctaacaggcaaggcttcggttatcgacggtcggccagactatggc
ttcggtgatgccttcagatcgcacccagtcaaggatatgagccaggttcttctcgattac
ggcttctcctgggaaggcaaggactactttacgtctggcttgacaggagagccgctggag
gcatacattttcaacggccccatctactatcagcgattgaagcacatggtccaagacaag
atgcattcccgatctcgcggacccagggccatcctcaccagacagccaactgaaggtcga
tcccgtgacggtggactgcgtctcggagaaatggaacgtgactgcctcattgcgtatggc
gcctcacaactactcttagagcgtctcatgttgagctccgatggtgtcacgcttgacatt
tgtcagcagtgtggcctttttggatacaagggctattgtaacacctgtaagagcacgagg
gaagtgacacagatgcagatgccgtatgcggccaagctgcttgtacaggagctgatcagt
atgaatgtcggtgttcgtctgcaactggaggacgagttcccccatccccaatga
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integrated database retrieval system
