KEGG   Pochonia chlamydosporia: VFPPC_16899
Entry
VFPPC_16899       CDS       T09407                                 
Name
(RefSeq) DNA directed RNA polymerase domain-containing protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03020  RNA polymerase
pchm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VFPPC_16899
  09124 Replication and repair
   03420 Nucleotide excision repair
    VFPPC_16899
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pchm03021]
    VFPPC_16899
   03400 DNA repair and recombination proteins [BR:pchm03400]
    VFPPC_16899
Transcription machinery [BR:pchm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     VFPPC_16899
  RNA polymerase III system
   RNA polymerase III
     VFPPC_16899
  RNA polymerase I system
   RNA polymerase I
     VFPPC_16899
DNA repair and recombination proteins [BR:pchm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      VFPPC_16899
SSDB
Motif
Pfam: DNA_RNApol_7kD GFA Zn-ribbon_8 Herpes_UL49_1 HypA Zn_Tnp_IS1595 zinc_ribbon_9 YjdM_Zn_Ribbon TerY_C zf-C2HC5 YacG zf-ISL3 zf-UDP
Other DBs
NCBI-GeneID: 28858646
NCBI-ProteinID: XP_018137303
UniProt: A0A179F1F2
LinkDB
Position
Unknown
AA seq 73 aa
MPREEYQVPTTGSTAVRGNTREDHSSRSVMTYICGDCGSNVSLGKDALVACPHCAGRVLY
KERTKRMVQFEAR
NT seq 222 nt   +upstreamnt  +downstreamnt
atgccccgcgaggaataccaagtccctaccaccgggagcaccgccgtccgcggcaacacc
cgcgaagaccacagctcccgctccgtcatgacctacatctgcggcgactgcggatcgaac
gtttccctgggcaaagatgcgctggttgcgtgccctcactgcgcggggagggtgctgtac
aaggagagaacaaagcgaatggtgcagtttgaagcccgataa

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