Penaeus chinensis (fleshy prawn): 125027543
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Entry
125027543 CDS
T08118
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like isoform X1
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03020
RNA polymerase
pchn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125027543
09124 Replication and repair
03420 Nucleotide excision repair
125027543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchn03021
]
125027543
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125027543
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
125027543
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125027543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
125027543
NCBI-ProteinID:
XP_047472590
LinkDB
All DBs
Position
7:36566509..36577038
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AA seq
275 aa
AA seq
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MPYANQPSLNLTELTQENIKFYIEDTDLSVANSLRRVFMAETPTVAIDWVQLEENSTVLS
DEFIAHRVGLIPFTSDERVDQMQYSRDCTCTDYCPECSVEFTLDVRCLDDHTRHVTTADL
KSMDSRVIPVTSRLREDEASEYGESNDILIVKMRKGQGLKLRAYAVKGFGKEHAKWNPTT
GVAFEYDPDNSLRHTLYPKPEEWPKSEYSTIDENSAQADFDPSGKPNKYYYNIETSGALK
PENVIMMGIAALKKKLSDLQNQLNMEAHSDALAIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgctaatcagccctctttgaatttgacggagttgacgcaggagaatattaag
ttttatattgaagatacagaccttagtgtggctaatagcctgcgcagagtcttcatggcc
gaaaccccaacagtggctattgactgggtgcagctggaggagaactcaactgtactgagt
gatgagttcattgcccatcgcgtcggcctcatccccttcacgtcagacgagagggttgat
cagatgcagtattctcgagattgcacatgtactgactactgcccagagtgttcggtggag
ttcacactggatgtcaggtgcttggacgaccacacacgacatgttacaacagccgatctc
aagtcaatggactcccgagttattcctgtcacttcacgcctgagagaggacgaggcgagt
gaatatggagaatctaatgatattttgattgttaaaatgcgtaagggccaaggcctgaag
cttagagcctatgctgtaaagggttttggaaaggagcatgccaaatggaaccccacgacc
ggggtggcctttgagtatgatcctgacaactccctccgacacacactgtatcccaaacct
gaggaatggcccaagagtgaatattccaccatcgacgaaaactctgcccaggccgacttt
gaccccagcggtaagcccaacaaatactactacaacatagaaacgtctggggcccttaaa
cccgagaacgttattatgatggggatcgctgctctcaagaagaaactgtccgacttgcag
aaccagctgaacatggaggcacattccgatgcgcttgctattaactga
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