Penaeus chinensis (fleshy prawn): 125028257
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Entry
125028257 CDS
T08118
Name
(RefSeq) DNA polymerase subunit gamma-1-like
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125028257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchn03032
]
125028257
03029 Mitochondrial biogenesis [BR:
pchn03029
]
125028257
Enzymes [BR:
pchn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125028257
DNA replication proteins [BR:
pchn03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
125028257
Mitochondrial biogenesis [BR:
pchn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
125028257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
DUF1454
Motif
Other DBs
NCBI-GeneID:
125028257
NCBI-ProteinID:
XP_047473637
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All DBs
Position
8:complement(19467079..19483053)
Genome browser
AA seq
1352 aa
AA seq
DB search
MLQIRKVACYNRQLQCLCRLPKNLWQQYAGVDYVKVRHKSTTKKPLEGPLQQENSSFTED
FSSLSESYINQDSIKCYDGDQIQRIVKEHPSHKQLEKEVDTADFSEFYKRYGEGSVRSSE
NTENSSISILPLNDVLKTLQEEHFKRYPSGGQEKRQERTQVPSDSNIDREQKTNSKATNS
KKGKDVHKNFHQKSSTSLSKKKIVIIKGKNDINKNKIDKINEIPRNQNQVKPLTGTLHGL
SDEGKTLLDLSEKYGKEAERKENSESRIREILLKEFNGIQNKKSASTMYRESKLGIQMLS
SPLYEQLFSTVTPKEEQEIEDDLERSKEHLMAQGLWGKEPSVVPDFDFKLPPLKDRELDQ
HFRIIAEEQSAPYKALLNQLLGADIPSFPRKWQFMPGWTRYNPNGSFTAVDYPDCKALVF
DVEVCVEEGKAPTLATAVSDKYWYSWCSNLLVEDQREGTQEVLYNDLIPLESLKETDFNQ
GKSMPRVIIGHNVSYDRLRVREQYQVEGTPVRFVDTMSLHIAVSGLISEQRAMMLKNKNA
DQKIRLPWMFVGCQNSLNEVFKFYCHTDEELKKDTRNVFVKGSIVEIREDFQNLMSYCAS
DVKATHMVLVKLLPLFFERFPHPVSFAGMLEMGTTFLPVTWNWPKYISAAESEFHRMERL
LNEELVKQARGALKYVDNKEYENDPWLWSLDWSVPKGRVKKLPGYPNWYRKLCAHTGERE
GTPEPENMSTSLQVVPRLLRLTWNGLPLHYERKYGWGYLKPIYDNVNEIPHQKTTLDSNS
VYQTFPVNALYKMYAGQKIDIESFLKDKENKTNDLPETEQDWLSLLSESDSDVKVYEKRK
SRDQNQKKKDEEKGYDIGIPGVLFIPLPHKDGPGNRVGNPLAKDFLLKIEDKTLSSYFGD
IAELVLKTSKSLSYWRNNRDRILSQMVIWNDQNDNTGKEISEANEKKECRTGIILPMVVT
AGTITRRAVEPTWMTASNAYVDRIGSELKAMVEAPPGYNFVGADVDSQELWIAAVLGDAY
FSGEHGATALGWMTLQGKKSDGSDMHSRTANTAGISRDHAKVINYGRIYGAGLRFIQRLL
RQFNPKLSEEETQQRATQLFATTKGQKGWYLNKMGQNLALELNYPISGEALDRKEINKLL
RQARYNNIEASFYDIVDGPAVWVGGSESYMFNCLEAIARSEEPRTPVLGARVTRALEAKY
VDDQYMTSRVNWVVQSSAVDYLHIMLVSMKWLFQEYNIRGRFCISIHDEVRYLVATKDSH
RAALALQITNLLTRSLFAQKLGFKDLPQSVAFFSAVDIDYVLRKEPHLDCVTPSNPEGLN
KGYGIPPGEALDMQKILEVTSGILEKNGEDAR
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaaataagaaaggtagcatgttataatagacagttacagtgcttatgcagactt
ccaaagaatctgtggcagcaatatgcaggtgttgattatgtgaaagttagacataaatca
acaactaagaagcctttagaaggaccattacaacaagaaaacagctcattcaccgaagac
ttcagttcactatcagagtcctatattaatcaagatagtattaaatgttatgacggagac
caaatacagagaattgtaaaagagcacccatcccataagcaattagaaaaggaagttgac
acagcagacttttcagaattttataagaggtatggagagggctcggtaagaagtagtgaa
aatactgaaaacagcagtatatcaattcttccattgaatgatgttctgaagactcttcaa
gaggaacattttaaaagatatccaagtggaggccaggagaaaaggcaagaaagaactcaa
gtcccaagtgactcaaatattgatagagaacagaaaactaatagcaaggctactaattcc
aaaaaaggaaaagatgttcacaagaattttcatcagaagtcaagtacttcactgagtaag
aaaaaaattgttattatcaaagggaagaatgatattaataaaaataaaattgataaaata
aatgaaattcctaggaatcagaatcaggtaaaaccactcactggaacattacatggattg
tcagatgaagggaaaacattactcgatttgtcagaaaaatatggaaaagaagctgagaga
aaagagaacagcgaatcaagaataagagaaatattactaaaagaatttaatggtattcaa
aacaagaaatctgccagtacaatgtatagggagagtaagcttggaatacaaatgctctca
tctcccctctatgaacaactcttttctactgtcactccaaaagaagaacaggagattgaa
gatgatttagagagaagcaaggaacatcttatggctcaaggcttgtggggaaaagaacca
tctgttgttcctgactttgatttcaagttgcctccattaaaagatagagagcttgatcaa
catttccgcattattgctgaagagcagtctgcaccctataaagctctgcttaatcaatta
ttaggtgctgatataccaagttttcccagaaaatggcagtttatgccaggatggacccgt
tataatcctaatggaagtttcacagcagttgattacccagactgtaaagctttagttttt
gatgtggaagtgtgtgtagaagaagggaaagcgccaactttagctacagcagtttcagat
aagtattggtattcttggtgtagtaatttattggttgaagatcaaagagaaggaacccaa
gaagttctttacaatgaccttatacctcttgaatcattaaaagaaactgacttcaatcag
ggcaagagcatgccacgagtcatcattgggcataatgttagttatgatagattaagggta
cgtgagcagtaccaagtggagggaacgccagtacgttttgtggatacaatgtcattacac
atagctgtaagtggacttatttcagagcaaagagcaatgatgttaaaaaataaaaatgca
gatcaaaaaattaggcttccttggatgtttgttggatgccaaaacagtcttaatgaagtc
tttaagttttactgccacacagatgaagaactgaaaaaggatacacgaaatgtatttgtc
aaaggcagtattgttgagattcgtgaagattttcaaaatctgatgagttactgtgctagt
gatgtgaaagctacacacatggtactagtaaagttgttacctttattttttgaacgattt
cctcatccagtaagttttgctggtatgttagaaatgggaacaacatttttaccagtaaca
tggaactggcctaagtatatcagtgctgcagagtctgaattccatagaatggaaagactg
ctaaatgaagaattggtgaaacaggcaagaggagcactaaaatatgtagataacaaagag
tatgaaaatgacccatggctttggagtcttgactggtcagtaccaaaaggaagagtaaag
aagttacctggatatccaaattggtataggaaattatgtgcacacactggagaaagggaa
ggtacacctgaacctgaaaacatgagcacaagtttacaggttgtaccaagactgctaaga
ttaacctggaatgggcttcctctgcattatgagagaaaatatggttggggatacttgaaa
cctatttatgataatgtgaatgaaataccacatcagaaaacaacattggacagcaacagt
gtgtatcagacttttccagtaaatgctctctataagatgtatgctggccagaaaattgat
attgaaagtttcctaaaagataaagaaaataagaccaatgatctgcctgaaacagaacaa
gattggttgtcccttttgtccgagagtgattcagacgttaaagtttatgaaaaaaggaaa
tcaagagaccagaatcaaaagaaaaaagatgaagaaaaagggtatgatattgggattcct
ggagttctatttattccattgccgcataaagatggaccaggcaatcgagtgggtaatccc
cttgcaaaagactttcttctgaaaattgaagataaaactttaagcagttactttggagat
atagccgagttagttctgaagaccagcaaatcattgtcatattggcggaataacagagac
agaatactttcccagatggtcatatggaatgaccagaatgataatactggtaaagagatt
tcagaagctaatgaaaagaaggaatgtagaactggtattattttgccaatggtagtgaca
gcgggtactatcactcggcgtgcagtggaacctacatggatgacagcctctaatgcctat
gtagatcgcattggttctgaactgaaagccatggttgaagcccctcctggatacaatttt
gttggagcagatgttgattcgcaagaattgtggattgctgcagtgcttggtgatgcatat
ttctctggtgagcacggagctactgctcttggctggatgacattgcaagggaaaaagtct
gatggttcagatatgcacagtcgaactgccaatacagctggcatatcacgtgatcatgct
aaggtcattaattatggaagaatttatggggcaggattacgctttattcaaaggcttttg
cgtcagttcaatcctaaattatcagaagaagaaactcagcaacgtgccacacaactgttt
gcaactaccaagggacaaaaaggatggtacctcaacaagatgggacaaaatcttgccttg
gaactgaattatccaatcagtggagaagctctagatcgcaaagagataaataagttgctg
agacaggccagatataacaacatagaggcatccttttatgatatagtggatggtcctgct
gtatgggtaggtggctccgagtcatatatgttcaactgtttagaagcaatagccaggtct
gaggagccacggacaccagtactaggggcaagagtaactcgagctcttgaagcaaagtat
gtggacgaccagtacatgactagcagagtgaactgggttgtccagagctcagctgttgat
tatcttcacatcatgcttgtgtcaatgaaatggttattccaggagtacaacattagaggg
agattctgtattagcatccatgatgaggtgagatacctggtagcaacaaaagactcccat
cgtgctgctctggctctgcaaatcaccaacttactgacacgttcactcttcgctcaaaaa
ttaggtttcaaagatttgcctcagtcagtagcattcttcagtgcagtagacattgattat
gttcttcgaaaagagcctcatctagactgtgttacaccttcaaatcctgaaggactgaat
aaagggtatggaattcctccaggagaggcacttgatatgcagaaaattcttgaggtcact
tcaggtattcttgagaaaaatggagaggatgccagatga
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