Pseudomonas chlororaphis subsp. piscium: C4K32_0401
Help
Entry
C4K32_0401 CDS
T09060
Name
(GenBank) tRNA 4-thiouridine synthase
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp00730
Thiamine metabolism
pchp01100
Metabolic pathways
pchp01240
Biosynthesis of cofactors
pchp04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
C4K32_0401
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
C4K32_0401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pchp03016
]
C4K32_0401
Enzymes [BR:
pchp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
C4K32_0401
Transfer RNA biogenesis [BR:
pchp03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
C4K32_0401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AZC67092
LinkDB
All DBs
Position
435089..436543
Genome browser
AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSRPVRTRFIRQLAKNIRAVLRDLDPAVVVNGVWDNLELETAVSEPK
ALKEMTERLSCMPGIAHFLQVDEYPLGDFDDIVAKCKQHFGEALAGKVFAVRCKRAGKHE
FSSMDVEKYVGSQLRRQCGAAGISLKEPEIEVRMEIRDQRLFVIHSQHSSIGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAHELGVMEVAHYIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNSHMGVILKRMMLRAASSIADRLHIDALVTGEAISQVSSQTL
PNLSVIDCVTDKLVLRPLIASHKQDIIDLANEIGTADFAKHMPEYCGVISVNPKTHAKRH
RVEHEEKEFDMAVLERAIERAKLVPIDRVIDELGQDLQIEEVSEALAGQIVIDIRHPDAQ
EDDPLELAGIEIKALPFYALNARFKELDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatcgttaaagttttcccggaaatcaccatcaagagccgcccggtacggacg
cgtttcatccgtcagctggccaagaacatccgtgccgtgctccgcgatctggacccggct
gtggtggtcaatggtgtgtgggacaacctcgagctggaaaccgccgtcagcgagccgaaa
gccttgaaggagatgaccgagcgcctgagctgcatgccgggcatcgcgcatttcctgcag
gtcgatgaatacccgctgggcgacttcgacgacatagtcgccaagtgcaagcagcacttt
ggcgaggccctggcggggaaagttttcgccgtgcgttgcaagcgcgccggcaagcatgaa
ttcagttccatggacgtggagaaatacgtcggcagccagctgcgtcggcagtgcggcgcc
gccggaatttccctcaaagagccggaaatcgaagtgcggatggaaattcgcgaccaacgg
ttgttcgtgatccacagccagcacagcagcatcggcggttatccgctgggcgccctggaa
cagaccctggtcctgatgtccggcggtttcgattccacggtggcggcctaccagatcatg
cgtcgcggcctgatgagccacttctgcttcttcaacctgggcgggcgtgcccacgaattg
ggcgtgatggaagtcgcgcactatatctggaagaagtacggcagctcccagcgcgtgctg
ttcgtcagcgtgccgttcgaggaagtgctcggcgaaatcctcggcaaagtcgacaacagt
catatgggcgtcattttgaagcgtatgatgttgcgtgccgcgtcgagcatcgccgaccgc
ctgcacatcgacgcgctggtcaccggcgaggcgatttcccaggtgtcgagccagaccctg
ccgaacctctcggtcatcgactgcgtaaccgacaagctggtgctgcgcccgctgatcgcc
agccacaagcaggacatcatcgacctggccaacgaaatcggcaccgccgacttcgccaag
cacatgccggagtactgcggggtcatctcggtgaaccccaagacccatgccaagcgccat
cgcgtggagcatgaagagaaagaattcgacatggcggtgctcgagcgtgcgatcgagcgg
gccaaactggtgccgatcgatcgggtgatcgatgaactgggccaggatttgcagatcgaa
gaagtcagcgaagcgctggcgggccagatcgtgatcgacatccgtcatccggatgctcag
gaagacgacccgctggagttggctggcatcgagataaaagcgctgccgttctatgcattg
aatgcacgcttcaaggaactggaccctactcgccagtacctgctgtattgcgacaaaggc
gtcatgagtcgcctgcatgctcaccatctgctcagtgagggacatgccaatgtgcgcgtt
tatagaccgagctaa
DBGET
integrated database retrieval system
