Pontibacillus chungwhensis: QNI29_10155
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Entry
QNI29_10155 CDS
T09116
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
pchu
Pontibacillus chungwhensis
Pathway
pchu03030
DNA replication
pchu03430
Mismatch repair
pchu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QNI29_10155
03430 Mismatch repair
QNI29_10155
03440 Homologous recombination
QNI29_10155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchu03032
]
QNI29_10155
03400 DNA repair and recombination proteins [BR:
pchu03400
]
QNI29_10155
Enzymes [BR:
pchu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QNI29_10155
DNA replication proteins [BR:
pchu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QNI29_10155
DNA repair and recombination proteins [BR:
pchu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QNI29_10155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
tRNA_anti-codon
HHH_6
DEDDh_C
HHH_3
RNase_H_2
FtsX_ECD
DUF1409
PSP
Motif
Other DBs
NCBI-ProteinID:
WIF99996
LinkDB
All DBs
Position
1958824..1963122
Genome browser
AA seq
1432 aa
AA seq
DB search
MDLSQLEKMQLLLKQIEMPEDLVNAHFQDSKLTKLSVHKPTKEWHFYFYIPTVLPPEVYA
VFTSKLYEAFHHIATITWSIETGEKKLDEDSICDYWMHFVKSIPDLSPAYKDLLHEQRPK
IEGNKLVLHARNDAEAHALKRRLSEPFQAFCNRVGASLYVLTVEVSSSEEALEQFKQQKK
QEDKDIVQKAIQEKEQRAKDKDDDEVLHDGPLLIGYNIKDVPDKIESIQEEENTMVIQGY
VFDVEIRELRSGRHLLMAKMTDYTDSIQVKMFSRRDDDEEKFQRLKKGMWIKAKGRVQTD
NYTNELTMMGSDINEVKPVVRKDEAPEGEKRVELHAHTTMSQMDSTVSASRLIEQAANWG
HKAIAITDHAVVQSYPEAYGAGSKHGVKVLYGLEANIVDDGVPIAYEEQDRDLATDEYVV
FDVETTGLSAIYDTVIELAAVKIKEGEIIDRFESFANPHEPLSQTTTDLTGITDDMVKDA
PDPDEVFKDFHKWMGDSILVAHNASFDMGFLNAGLQKIGYEKASNPVIDTLELARLVVPQ
LKNHRLNTLCKQFDIELTQHHRAIYDAEATGYLLWKLLKEAQKKDIHNHMDLNKFMGEGN
AYQRSRPSHAILLAQNPTGLKNIYKLVSMSLVNYFYRVPRIPRSVLKKYREGILIGSGCD
KGEVFEAMMQKSQDEAEKVAEFYDYIEVQPPSNYYHLIEKDLVRNEAHLYDILKNLINMA
DRLEKPVVATGNTHYVDPHEKIYRKILIGSQSGNPLNRQTQPDVHFKTTNEMLDDFSFLD
EETAKRVVVTNSQHIADSIEEIKPVKDDLYTPNIDGANDEMREMTYNKARSIYGDPIPEL
VEKRIEKELDSIIGNGFAVIYLISQKLVTKSLDDGYLVGSRGSVGSSFVATMTDITEVNP
LPPHYVCTACQKSEFFTDGSVGSGFDLPEKDCPDCEIPYKKDGQDIPFETFLGFKGDKVP
DIDLNFSGEYQPRAHNYTKVLFGEDKVFRAGTIGTVAEKTAYGFVKGYASDHELQYKNAE
VDRLVQGCTGVKRTTGQHPGGIIVVPDDQDIYDFTPIQYPADDQSSEWMTTHFDFHSIHD
NLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDEEVMKIFSGPQVLGVEPDQIMCKTGT
LGVPEFGTRFVRQMLEDTKPSTFAELVIISGLSHGTDVWLNNADQLISDGICTLSEVIGC
RDDIMVYLMHKGLEAPTAFTIMEFVRKGRGLKPEWIEEMKKHGVPDWYIESCKKIKYMFP
KAHAAAYVLMAVRIAYFKVHHPIYFYAAYNTVRASDFDIDTMVKGSEAVRARIKEINGKG
LDATPKEKSLLTVLELSLEMQERGFSFQKVDLYRSAASEFLVDGDTLIPPFNSIDGLGTN
AAINIVKAREDGEFLSKEDLRERSRISKTVLEYLDDHGCLQGLPDKNQLSLF
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggacctttcgcaattagaaaaaatgcagttgctcctaaagcaaatcgaaatgccagaa
gatcttgtgaatgcccattttcaagatagcaagttaacaaaactatccgtgcacaaacca
acaaaggaatggcacttttacttttatattccaaccgtgttaccaccagaggtatacgct
gtgttcacttcgaagttgtatgaagcttttcatcatatagctacgattacatggtcaatt
gaaacaggcgaaaagaaattagatgaagacagcatttgtgattactggatgcactttgtt
aaatcaatacctgatctatctcctgcctataaagacctccttcatgaacagcgcccaaaa
attgaaggaaacaaattggttttgcatgcacggaatgatgctgaagctcatgctttaaag
cgtcgattaagtgaacctttccaggcgttttgtaatcgtgtaggggcttctctgtatgtg
ttaacggttgaagtgagttcttctgaggaagcacttgagcaattcaaacaacagaagaaa
caagaagataaagacattgttcaaaaagcgattcaagaaaaggaacaacgtgcgaaagat
aaagatgatgatgaagtccttcatgatgggccacttcttattggttataacattaaagat
gttcctgataagattgagtctattcaagaagaagaaaatacgatggttattcaagggtat
gtgtttgatgtagaaattcgagagctacgctcaggtcgtcatttactaatggctaaaatg
accgactacacagactctattcaagtgaaaatgttctcacgtcgagatgatgacgaagag
aaattccagcgcttgaaaaaaggaatgtggatcaaagcaaaagggcgagttcaaacagac
aactacacaaatgagctaacgatgatggggtctgacattaatgaagtaaagccagtggtt
cgaaaagatgaagctccagaaggagaaaaaagagttgaactccatgctcatacaacaatg
agtcaaatggattctaccgtttctgcttctagattaattgagcaagcagccaattggggg
cataaagctattgctataacagatcacgcagtcgtacaatcttatcctgaagcctatggt
gctggtagcaagcatggagttaaggttctttatggtttagaagcgaatattgtagatgat
ggtgtgccgattgcttatgaagaacaggatcgtgatctggcaacagatgaatacgtcgtt
tttgacgttgaaactacagggttatcggctatttatgatactgtaattgaactagcagcg
gttaagattaaagaaggcgagatcattgatcgatttgaatcctttgctaacccacatgaa
ccattaagccaaaccacaacagatttaacagggattacagatgatatggttaaagatgcc
cctgaccctgatgaggtatttaaagattttcataaatggatgggtgattctatactcgta
gcccataacgcaagctttgacatgggctttttaaatgctggtttgcaaaaaatcgggtat
gagaaagcttctaatcctgttattgatacgttagaacttgcacgtctagttgtgccacag
ttaaaaaatcaccgtcttaataccttatgtaaacagttcgatattgaacttacgcaacac
caccgtgccatctatgatgcggaagcaacagggtatttgttatggaagctgttaaaagag
gcgcagaaaaaagatattcataaccatatggatttaaacaaatttatgggggaaggaaat
gcttatcagcgttctcgcccatcccatgctattcttttggctcagaatcctacgggtctt
aagaatatttacaaacttgtttccatgtcccttgtgaattatttctaccgggtaccccga
attcctcgttctgtgctaaagaaataccgtgaaggaattttaattggtagcggttgtgac
aagggtgaagtatttgaagccatgatgcagaagtcacaggatgaagcagagaaagtggct
gagttttatgactatattgaagtgcagccgccttcaaactactatcatttaatcgagaag
gaccttgtacggaatgaagcccatttatatgacattttaaagaacttaatcaatatggct
gaccgcctagaaaagcccgtggtagcaacaggcaatacccattacgtagaccctcacgag
aagatttaccgtaaaatccttattgggtcccaaagtggtaatccacttaatcgacagacg
caaccagatgttcattttaaaaccacaaatgaaatgcttgatgacttctccttcttagat
gaagaaacagcgaagagggtggtggtaaccaactctcagcacatagctgattcaattgaa
gagatcaaacccgtaaaggacgatttgtatactccaaatattgacggggcgaacgatgaa
atgcgtgaaatgacgtataacaaggctagaagtatttacggagatccaatacctgaactt
gtcgaaaaacgtatcgaaaaagagctcgatagtattattggtaacggatttgcggtaatc
tatttgatttcacaaaaacttgtaacgaaatccttagatgatgggtacctagtcgggtct
cgtggttcagtaggttcatcattcgtagctacgatgacagatattacggaagtaaatcct
ttgccacctcactatgtgtgtacggcttgtcagaaatcagaattctttacagatggttcg
gttggttcaggttttgatttaccagagaaagattgtccggattgcgagattccatataag
aaagatggacaagacattccctttgagacgttccttggatttaaaggagataaagtacct
gatattgacttaaacttctctggtgaatatcaaccacgtgcacacaattatacgaaagtg
ctgtttggtgaagataaggtattccgtgcaggtacaattggtacagtagcagagaaaaca
gcgtacgggtttgtaaaaggctatgcaagcgatcatgagcttcagtataaaaatgcagaa
gtagatcggttagtacaaggatgcactggggttaaacgaacaaccggacagcacccaggg
gggatcattgttgtccctgatgaccaagacatttatgattttacgccgattcagtatcca
gcagacgatcaatcatctgaatggatgacgacacactttgacttccattctattcacgat
aatttattaaagcttgatatcctagggcatgatgatcctacagtaattcgtatgctacaa
gacttgagtgggattgaccctaagacgattccgactgacgatgaagaagtgatgaaaatc
tttagcggaccacaggttttaggcgttgaacctgatcaaattatgtgtaagacaggaaca
ctaggtgtacctgaatttggtactcgctttgtgcgccaaatgttagaggatacgaagcca
tctaccttcgcagaacttgtcattatttcaggtttatcccacggaacggatgtctggcta
aacaatgccgatcagcttattagtgacggaatctgtactctttctgaagtaattgggtgc
cgtgatgatattatggtttatttgatgcacaagggactagaggcccctacagcctttacc
attatggagtttgttcgtaagggacgtggccttaaacctgagtggattgaagaaatgaaa
aaacatggtgtaccagattggtatattgagtcttgtaaaaagattaaatacatgttccct
aaagcccacgctgcagcctatgttcttatggcagtacgcattgcttatttcaaagttcac
catccgatttatttttatgcagcttataacactgtacgtgcgagtgactttgacatcgat
acaatggtgaaaggttctgaagcggttcgagcacgtatcaaagagatcaacggaaaaggt
ctcgacgctacaccgaaagaaaaaagtttattaaccgttttagaactttctcttgaaatg
caagaacgtggattctccttccaaaaggtagatctatatcgttctgcagcaagcgagttt
cttgtagatggggataccctcatcccgccatttaactccattgatggattaggaacaaac
gcagccatcaatattgttaaagcgcgagaagacggagaattcttatctaaagaggacctc
cgagagcggagtcgaatttcgaaaacagtcttagagtaccttgatgatcatgggtgttta
caaggattgccggataaaaaccagttatccctgttctaa
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integrated database retrieval system
