Pseudomonas cichorii: PCH70_00320
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Entry
PCH70_00320 CDS
T03002
Name
(GenBank) cyclic diguanylate phosphodiesterase
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PCH70_00320
Enzymes [BR:
pci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PCH70_00320
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GFIT
Motif
Pfam:
EAL
CSS-motif
Motif
Other DBs
NCBI-ProteinID:
AHF65185
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All DBs
Position
complement(32922..34541)
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AA seq
539 aa
AA seq
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MLIAQTRFRIHLSHPWLLALLAALLSAAVFLFGSFGLAMHQARQNESLQMNAQGERFLVR
LEQLFGQLRAGLDQLEQQPLRRCSPEMVGRLREVISSHRFIYEAAYVGDARTCSSWPRPK
VLSEPREPDIRGPTYDYWLNTSTQPDDNLAALVLGRGDFRISTSRGHLTDVVDLPAGGSL
LVVLDNGTRAIPVLGPAQAWPPVKDWLPDSNTTLITTANQLIYRMPTQSPEYQLVLITPR
TDLQVKITGAWRLLVPASLLMSLCIAALVLQLMQQRKSLGAELSGALRREELKVLYQPIF
NLETGLCVGAEALVRWRRPDGTLTSPDLFIPLAENTGQIRQITDFVLQQSLEKLGPLLRA
NPHLYVSVNLAACDVIAPRIGRVTARLLAQHKVAARQIAFEVTERGLIDVVVARNHLQML
RDRGHQILIDDFGTGYCSLAYLQTLPVDCLKIDKAFIDALGHDAASSGVAPHIIRMAHAL
QLRVIAEGIEFESQAHLLRSEGVVYGQGWLFARPLTATRFCELVTGGRRGTGRRKDDVA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgcgcaaacgcgctttcgcattcacctttcccacccttggctgctggcgttg
ctggcggccttgttgagcgcggctgtctttttattcggcagtttcgggctggccatgcat
caggcgcgacaaaacgaaagcctgcagatgaacgctcagggcgagcgcttcctggtgcga
ctggagcagcttttcggtcaactgagagccgggctggatcaactggagcagcaaccgctg
aggcgatgcagcccggagatggtcgggcgcttgcgcgaggtcatttccagccaccgcttc
atttatgaagccgcgtatgtgggagacgcacgcacctgctccagttggccacggcccaag
gtgctcagcgaaccacgggagcccgacattcgcggcccgacctacgattactggctcaac
acctcgacccagccggacgataatctggcggcactggtattaggccgtggcgattttcgg
atatcgacttcacggggacatctgacggatgtggtggatcttccggcgggcggcagtctg
ctggtggtactcgataacggcacccgggcgataccggtgctgggaccggcgcaagcctgg
ccgcccgtgaaagactggttgccggacagcaacaccacgctgatcacgacagcgaaccaa
ctgatctaccgcatgcccacccagagcccggaatatcaactggtgctgataaccccgcgc
accgacttgcaggtaaagatcaccggagcctggaggttgctggtgcccgccagcctgtta
atgtctttatgcatcgcggcgctggtcctgcaattgatgcagcagcgcaaatccctgggg
gccgagttatcgggggcgttgcggcgcgaggaattgaaagtcctctatcaacccatcttc
aaccttgaaaccggcttgtgtgtgggtgccgaagcgctggtgcgctggcgcaggccggac
ggcacactgaccagcccggacctgttcatcccgctggctgaaaacaccgggcagatccgc
caaatcaccgactttgtcttgcagcagtcgctggaaaaactcggaccgctattgcgcgcc
aacccgcatctgtacgtttcggtgaacctggcagcctgcgatgtcatcgccccgcgtatt
ggtcgcgtaacggccagattgctggcccagcacaaggtggctgcccgacagatcgcgttc
gaggtgaccgagcgcggcctgatcgatgtggtcgtggcgcgcaaccacctgcaaatgctg
cgcgaccgcggccatcagatcctgatcgatgacttcggcaccggctattgcagcctggcc
tacctgcaaaccttgccggtggactgcctgaaaatcgacaaggccttcattgatgcatta
ggccacgacgccgccagcagcggtgtggcgccccatatcatccgcatggcccacgccctg
caattgcgggtgatcgccgaaggcatagagtttgaatcccaggcccacctgctcaggagc
gaaggcgtcgtctacggccagggctggctattcgcccgccctctgaccgccacccgattc
tgcgaactggtcaccggcggtcgaagagggacggggcggcgcaaagatgatgtggcgtga
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