Pseudomonas cichorii: PCH70_22740
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Entry
PCH70_22740 CDS
T03002
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pci
Pseudomonas cichorii
Pathway
pci00500
Starch and sucrose metabolism
pci01100
Metabolic pathways
pci01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PCH70_22740
Enzymes [BR:
pci01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PCH70_22740
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
AHF67427
LinkDB
All DBs
Position
complement(2563013..2565196)
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AA seq
727 aa
AA seq
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MNTKSKTVKSDTSTTHETPAGSTSRIREGLPFPLGASWDGLGVNFALFSANATKVELCLF
DSSGEVELERIELPEYTDEIFHGYLPDAHPGLIYGYRVYGPYDPKNGHRFNHNKLLIDPY
AKQLVGELKWSEALFGYTIGHPDGDLSFDERDSAPFVPKSKVIDPAYTWGRDQRVGTPWD
KTILYETHVRGFTMRHPAVPEELRGTFSGLMVEEVIDHVRKLGVTAVELLPVHAFVNDQH
LLHKGMTNYWGYNSIAFFAPDPRYLAHGKIAEFKEMIAHMHHAGLEVILDVVYNHTAEGN
ELGPTLSMRGIDNASYYRLMPDDKRFYINDSGTGNTLDLSHPCVLQMVTDSLRYWASEMH
VDGFRFDLATILGRYHDGFDERHSFLVACRQDPVLRQVKLIAEPWDCGPGGYQVGGFPPG
WMEWNDKFRDTVRAFWKGDDNQLADFAGRMTASGNMFNQRGRRPQASVNFITAHDGFTLH
DLVSYNDKHNEANDENNQDGSNNNLSWNHGVEGPTDNPEINQLRLRQMRNFFATLLLAQG
TPMMVAGDEFARTQHGNNNAYCQDSEIGWVNWDLDSDGKALLKFVKRVIKLRQSYPILRR
SRFLVGDYNEEIGVKDVTWLAPDGNEMSVEQWHDSNARCLGMLMDGRAQETGIRRPGADA
TLLLVVNAHHEGVDFTFPQVPEGTHFTCLIDTNQEDLRSKEQFDFGSHYTVTPRSLLLFE
LQREDQS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaagtccaaaaccgtgaaaagcgatacttcgacgactcacgaaacaccagcc
ggctcgacctcacgcattcgtgaagggctgcccttccccctcggcgccagttgggacggt
ctaggggtcaactttgcgttgttctccgccaacgcgaccaaggtagaactgtgcctgttc
gactccagcggcgaggtggagctggagcgtatcgagctgccggagtacaccgatgaaatc
tttcacggctaccttcccgacgcgcatcccggcctgatctacggctacagggtctatggc
ccttacgacccgaagaatggccatcgcttcaaccacaacaaactgctcatcgacccctat
gccaaacaactggtcggcgaattgaaatggtcggaagccttgttcggctacaccatcggc
cacccggatggcgacctgagtttcgatgagcgtgacagtgcgcctttcgtgcccaagagc
aaagtcatcgacccggcctacacctggggccgcgaccaacgggtcggtacgccgtgggac
aagaccattctctatgaaacccacgtacgcggtttcaccatgcgccaccctgccgtaccg
gaagaattgcgcggcaccttctccgggctgatggtcgaggaagtcatcgatcacgtgcgc
aagctgggtgtgactgcggtcgagcttctgccggtgcatgccttcgtcaatgaccagcac
ctgctgcacaaaggcatgaccaactactggggctacaacagcatcgccttcttcgccccg
gacccgcgatacttggcacacggcaagatcgccgagttcaaggaaatgatcgcccacatg
caccatgcagggctggaggtgattctcgatgtggtctacaaccacaccgcagaaggcaat
gagctggggccgaccctgtccatgcgcggcatcgacaacgcctcgtattaccgattgatg
ccggacgacaagcgtttctacatcaacgattcaggcacgggcaacactctggacctgagc
catccttgcgtcttgcagatggtcaccgactccttgcgctactgggcgtcggagatgcat
gtcgacggtttccgcttcgacctggcgaccattctgggccgctaccacgacggtttcgat
gagcgccacagcttcctggtcgcctgtcgccaggacccggtcctgcgtcaggtcaaactc
atagccgagccctgggactgtggccccggcggttatcaggtgggtggcttcccgccgggc
tggatggagtggaacgacaaattccgcgataccgtgcgggccttctggaaaggcgacgac
aatcaacttgccgacttcgccgggcgcatgaccgcctcgggaaatatgttcaatcagcgc
ggacgtcgccctcaggcctcggtgaatttcatcaccgcccacgacggcttcaccctgcat
gacctggtgtcctacaacgacaagcacaacgaagccaacgacgagaacaatcaggacggc
agcaataacaacctgtcctggaaccacggcgttgaaggcccgacggacaaccctgaaatc
aaccagttgcgcctgcgccagatgcgcaacttcttcgccactctgctgctggcccagggc
acgccgatgatggtcgccggcgacgagttcgcccgcacccagcacggcaacaacaatgcc
tactgccaggacagcgagatcggctgggtcaactgggacctggattccgatggcaaggcc
ctgctcaagttcgtcaagcgtgtgatcaagctgcgccagagctatccgatcctgcgccgc
agccgcttcctggtgggtgactacaacgaggaaatcggggtcaaggatgtcacctggctg
gcgccggacggcaatgaaatgagcgtcgaacaatggcatgacagcaacgcccgctgcctg
ggcatgctgatggatggccgcgcccaggaaaccggcattcgtcgcccaggtgccgatgcc
accctgctgctggtggtcaacgctcaccatgaaggtgtggacttcaccttcccgcaggtc
cccgaaggcacgcatttcacctgcctgatcgataccaatcaggaggacttgcgcagcaag
gagcagttcgacttcggctcccactacaccgtaacgccacgctcactgctgctgttcgag
ctgcaacgtgaagatcagtcatga
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