Pseudomonas cichorii: PCH70_41710
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Entry
PCH70_41710 CDS
T03002
Name
(GenBank) diguanylate cyclase (GGDEF) domain/cyclic diguanylate phosphodiesterase (EAL) domain lipoprotein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pci
Pseudomonas cichorii
Pathway
pci02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PCH70_41710
Enzymes [BR:
pci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PCH70_41710
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
AHF69324
LinkDB
All DBs
Position
4881814..4883862
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AA seq
682 aa
AA seq
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MKLELKHSLSVKLLRVVLLSALLVGVVLSCAQIVYDAYKTHQNVASDAERILDMFRDPST
QAVYSLDREMGMQVIEGLFQDDSVRMASIGHPNETLLAEKARPLKDSPIRWLTDIILGQE
RSFTTQLVGRSPYSEYYGDLRITLDTANYGESFIINAVIIFVSGVLRALAMGLVLYLVYH
WLLTKPLSRIIEHLTSINPDRPSEHLLPLLKGHEKNELGIWVNTANQLLASIERNTHLRH
EAENSLQRMAQYDFLTGLPNRLQLQTQLDKILVDAGRLQRRVAVLCVGLDDFKGINEQFS
YQTGDQLLLALADRLRAHSGRLGALARLGGDQFALVQADIEQPYEAAELAQNILDDLEAP
FALDLHEIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKTRSRNRYQFYIASVDSEMR
RRRELEKDLREALPRGQLYLVYQPQISYRDHRVMGVEALIRWQHPEHGLVPPDVFIPLAE
QNGTIIAIGEWVLDQACRQLREWHDQGFTELRMAVNLSTVQLHHSELPRVVNNLLQIYRL
PPRSLELEVTETGLMEDIDTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETSEQEAYIISEGCHEGQGYLYS
KPLPGRDILPYLKQAQRSQVEA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctggaactcaaacacagcttgtcggttaagttgttgcgcgtagtactgctttca
gcgctgctcgtgggcgttgtcttgagttgcgcacaaattgtctacgatgcctacaagacc
caccagaacgtggccagtgatgccgaacgtattctggacatgttccgtgacccgtcgacc
caggcggtgtacagcctggaccgggaaatgggcatgcaggtcatcgaaggtctgttccag
gatgactccgttcgcatggcctccatcgggcacccgaacgaaacgttgctcgcagaaaaa
gcgcgccctctgaaagattctcccattcgctggctcacagacatcattcttggccaggag
cgcagcttcacgacccaactggtcggccgcagcccctacagcgaatactacggtgatctg
cgcatcacgctggataccgccaactatggcgagagctttatcatcaatgcggtgatcatt
ttcgtgtcaggggtattacgtgccctggccatgggtctggtgttgtatctggtctatcac
tggctgctgaccaagccgctgtcccgaatcatcgaacacctgaccagcatcaacccggac
cgcccaagcgaacacctgctgccgctgctcaagggccatgaaaagaatgagttgggtatc
tgggtcaataccgccaaccagttgctggcctccatcgagcgcaatacccaccttcgccac
gaagcggaaaacagcctgcagcgcatggcccaatacgacttcctgaccggcctgcccaat
cgcctgcaattacagacacaactggacaagattctggtggacgccggacgcctgcagcgt
cgtgtcgcggtgttgtgtgtcggcctggatgatttcaaaggcatcaacgagcagttcagt
tatcagaccggcgaccagttgcttctggccctggcagaccggctgcgcgctcatagcggg
cgactgggtgctctggcacgcctgggtggcgaccagttcgctctggttcaggccgatatc
gagcagccttatgaagccgcagagctggcgcagaatattctggatgaccttgaggcgccg
ttcgccctggatcttcatgaaatccgcctgcgcgcaaccatcggcatcactttgttcccg
gaagacggcgacagcaccgagaagctgctgcagaaagccgaacagaccatgaccctggcc
aagacacgctcgcgcaaccgctatcagttctatatcgccagtgtcgacagcgaaatgcgc
cgccgtcgcgagctggaaaaagacctgcgcgaagccctgccccgaggccagctatatctg
gtctatcagccacagatcagctatcgcgaccatcgggtgatgggcgtcgaggcgttgatc
cgctggcaacacccggagcacggtctggtgccgcccgatgtcttcattccgctggcagag
cagaacggcaccatcatcgccatcggtgagtgggtgctcgatcaggcctgtcgccagttg
cgggagtggcacgatcagggcttcaccgaactgcgtatggcggtcaacctgtccactgtg
caacttcaccactcggaactgccccgcgtggtcaacaacctgttgcagatctaccgcctg
ccacctcgcagcctggagctggaagtcaccgaaaccggcctgatggaagacatcgacacc
gccgcccagcacttgctcagcctgcgccgctcaggtgcgctgatcgccatcgacgacttc
ggtaccggctattcgtcactgagttatctcaagagcctgccgctggacaagatcaagatc
gacaagagcttcgtgcaggacctgctcgacgacgatgacgatgcgaccatcgtgcgcgcc
attatccagttgggtaaaagcctcggcatgcaggtcattgccgaaggcgtggaaaccagc
gaacaggaagcctacatcatctccgaaggctgtcatgaaggtcagggctacctgtacagc
aaacccctgcccggccgtgacatcctgccgtacctgaaacaggcgcagcgcagccaggta
gaggcgtga
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