Pyrobaculum calidifontis: Pcal_1990
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Entry
Pcal_1990 CDS
T00483
Name
(GenBank) DNA-directed RNA polymerase, subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
pcl
Pyrobaculum calidifontis
Pathway
pcl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pcal_1990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcl03021
]
Pcal_1990
Enzymes [BR:
pcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pcal_1990
Transcription machinery [BR:
pcl03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Pcal_1990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-ProteinID:
ABO09405
UniProt:
A3MXN8
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All DBs
Position
1848012..1848596
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AA seq
194 aa
AA seq
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MPFKLVEAEDYVRIPPSEFGKPLEDIALAQLKARYENRVVREVGYVVAVLSVKVKREGKI
IFGDGGTYHKARFTLLAFVPLDGEVVEGVVENVREVGMLVRIGPIVGFINKIHVMDEPNI
FFDASTKSYIGERTRRRVSVGDIVRARITGVSFTTPREGTDLLLRVTMTMRMPGLGKLEW
IKEREKKAAPAKKA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
gtgcctttcaaattagtcgaggcagaggactatgtacgcatacctccgagcgagtttggc
aagccgcttgaggacattgccctcgcccagctgaaggcccggtacgaaaacagggttgtg
cgcgaggtggggtacgtcgtcgctgtcctctcggttaaggtcaaaagagagggcaagata
atattcggcgacggggggacttaccacaaggccaggtttaccctactggcctttgtgccg
ctggacggcgaagtggtggagggagttgtggagaatgtgagggaggtgggcatgttggtc
cgcatagggcccatcgtcgggtttataaacaagatccacgtcatggatgagccgaatatt
ttctttgacgcgagcaccaagagctacataggcgagcgcactaggcggagggtgtctgta
ggcgacatagtgagggcgcgcatcacgggggtgagctttacaacgccgcgcgaggggaca
gacctcctcctccgcgtcacaatgaccatgaggatgcccgggcttgggaaactagagtgg
attaaggagagagagaagaaggcggccccggccaagaaggcatga
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