Pedobacter cryoconitis: AY601_1433
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Entry
AY601_1433 CDS
T04341
Name
(GenBank) MFS transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcm02000
]
AY601_1433
01504 Antimicrobial resistance genes [BR:
pcm01504
]
AY601_1433
Transporters [BR:
pcm02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
AY601_1433
Antimicrobial resistance genes [BR:
pcm01504
]
Gene variants
Tetracycline resistance genes
Transporters
AY601_1433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_4
Motif
Other DBs
NCBI-ProteinID:
AMP98350
UniProt:
A0A127VAW2
LinkDB
All DBs
Position
complement(1650543..1651757)
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AA seq
404 aa
AA seq
DB search
MASPKKSAIGFIFITLLIDFTGFGIIIPVLPKLIEELTGGGLSVAALYGGYLTISYSIMQ
FISAPVLGGLSDKFGRRPILLASLFGLGIDYIFLAFAPTIGWLFVGRALAGVTGASFTTA
MAYIADVSTPEKRAQNFGMIGAAFGIGFIVGPVIGGVFSQFGLRIPFIISAVLALVNWLY
GYFILPESLAKENRRSFDWKRANPVGSLLRVVQFPKLIGLLAALFLLYLAAHAVQSTWTY
YTMEKFHWNEAWVGYSLGFVGIVVGVVQGGLIRIIIPKIGQEKAVFYGLFLYMIGFVLFA
FATKGWMMFAFMLPYGLAGIYGPAMQGIISNHVEANAQGEIQGFTASLMSMAAIFGPLIM
NNLFHYFTDPKNAIYFPGAPFLMAAFLTLIGLFICAAALKKHHS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcctctccaaaaaaatctgcaattgggtttatttttatcactttactgattgacttt
acgggatttggaattattatccctgttttaccaaaattaatagaagaacttactggtgga
ggactaagtgttgctgcactttacggcggttatctaactatttcctactctattatgcag
tttatcagcgcccctgtattaggtggattgagtgataaattcggtcgcagacctatactt
ctggcttctttattcggcctgggaattgattatatttttctggcttttgcgcccactatc
ggttggttatttgtaggcagagcattggccggagtaaccggagcgagctttaccacagcc
atggcctatattgctgatgtaagtacaccggaaaaaagagcacaaaacttcggaatgatc
ggggctgcctttggtattggtttcattgtagggccagttattggtggtgtatttagccag
tttggacttaggatcccttttattatttcagctgtgctggcattggtgaactggctatat
ggttatttcatcttaccagaatcattagccaaagaaaacagaagaagttttgactggaaa
agagcgaaccctgttgggtctttattacgggtcgtacaatttcctaaattgataggtctt
ttggctgctttattccttttataccttgcagcacatgctgttcagtcaacctggacttat
tatacaatggaaaaatttcattggaatgaggcttgggtgggatattctttaggctttgtc
ggaattgtagttggcgtagtacagggagggctgatccggataattattcctaagatcgga
caggaaaaagccgttttttatgggttgtttttatatatgatcggatttgtcctttttgcc
ttcgcgacaaaaggctggatgatgttcgctttcatgctgccttacggactggcaggtatc
tatgggccggctatgcaggggattatttctaatcatgtcgaggcaaatgcacaaggtgaa
atacaagggtttacggctagtctgatgagtatggcagcgatctttggtccgttaattatg
aacaatctttttcactatttcaccgatccaaaaaatgcaatttactttccgggagcaccg
tttttaatggctgcgtttctaacacttatcggtctgtttatttgcgctgcggcactcaaa
aagcaccattcctga
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