Pedobacter cryoconitis: AY601_3888
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Entry
AY601_3888 CDS
T04341
Name
(GenBank) Serine dehydratase
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00260
Glycine, serine and threonine metabolism
pcm00270
Cysteine and methionine metabolism
pcm01100
Metabolic pathways
pcm01110
Biosynthesis of secondary metabolites
pcm01200
Carbon metabolism
pcm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AY601_3888
00270 Cysteine and methionine metabolism
AY601_3888
Enzymes [BR:
pcm01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
AY601_3888
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Gene cluster
GFIT
Motif
Pfam:
SDH_alpha
SDH_beta
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
AMQ00744
UniProt:
A0A127VHE9
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Position
4596761..4598188
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AA seq
475 aa
AA seq
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MHREQISVFDIFKIGIGPSSSHTLGPWRAAQQFTASLANKGLLSGVEQVKILLYGSLAKT
GHGHGTDIAILLGMMGADPVTFDVNAIDSTVAAIKADQQLLLGGSHQITFDYTDDLIFLY
KESLPFHPNAVTFQAFLTNGSAFSETYYSIGGGFVVKEGETGGDKEQVELPFPVEVAGDL
LHWCLTTGLKVSEVVMENELMWRTEAETKKGMLQHFRVMKECTFRGCHTGGFLPGGLNVG
RRAAALNKRLIGDRTYTDYESWIQAIRAGGNSFNYTLDWVSCFALAVNEENASFGRVVTA
PTNGAAGVIPAVLQYYIAFCDGFEEEKITQFIACASEIGSIFKKGATISAAMGGCQAEIG
VSSAMAAAALTECMGGSQRQVMMAAEIAMEHHLGLTCDPIGGLVQIPCIERNTMGAIKAI
TASQLALQSNPDKAKVSLGAVVNTMWETALDMNSKYKETSDGGLATNIPISLPEC
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcatagagaacaaatctccgtatttgatatttttaagatcgggataggcccctcgagt
tcacatacccttggtccctggagggctgcccagcagtttacggcttcattagctaacaaa
ggccttttgagtggtgttgaacaggtaaaaatattgctatatggatctcttgcaaagaca
ggtcatggtcacggcactgacattgctattttattggggatgatgggtgcggatccggtg
acttttgatgtcaacgcgatcgattctacagttgcagcgattaaagctgaccaacagtta
ttgttaggtggcagtcatcagatcacttttgactatacagatgatttaattttcctttat
aaagagagtttaccttttcacccgaatgctgtaactttccaggccttcctgacgaacggc
agcgcattttctgaaacctactattctattggtggtggttttgtagttaaagaaggtgag
acaggtggagataaagagcaggtggagcttcctttcccagttgaagttgcgggagattta
ttacactggtgcttaactactggcttaaaagtttctgaagtcgtgatggaaaatgaactg
atgtggcgtacagaagcggaaactaaaaagggtatgctccagcatttcagagtgatgaaa
gaatgtactttccgtggttgccatactggtgggtttttacccggaggattaaatgttggc
cgcagagcagcagccttaaataaaaggctgattggcgacagaacctatacagattacgaa
agctggattcaagctatcagagctggcggaaatagtttcaactataccttagactgggtg
agttgttttgctttggctgtgaatgaagaaaatgcatcattcggccgcgtagtaacagct
ccgaccaatggtgctgcaggtgtgattccggcggtattacaatattatattgctttttgt
gatggctttgaggaagaaaaaattacccaattcattgcctgtgcatctgaaattggaagt
attttcaaaaaaggagcaacgatatcggcagcaatgggtggctgtcaggcagagattggc
gtttcttctgccatggctgcagctgcattaacagagtgtatgggcggttctcagcgacag
gtgatgatggctgcagaaattgccatggaacatcatttaggtttaacgtgcgaccctatt
ggcggtctggttcagattccttgcatagaacggaataccatgggtgcaattaaggcaatt
actgcaagtcagctggctttgcagagtaacccggataaggcaaaggtaagtttaggcgca
gttgtcaacacgatgtgggaaactgcactggatatgaactcaaaatataaagaaacttct
gatggtggtttagcaaccaacattccaatcagcttacctgagtgttaa
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