Phanerochaete carnosa: PHACADRAFT_187038
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Entry
PHACADRAFT_187038 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K09291
nucleoprotein TPR
Organism
pco
Phanerochaete carnosa
Pathway
pco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHACADRAFT_187038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_187038
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PHACADRAFT_187038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Mod_r
Fez1
Motif
Other DBs
NCBI-GeneID:
18910400
NCBI-ProteinID:
XP_007399406
JGI:
Phaca1_187038
UniProt:
K5VXN7
LinkDB
All DBs
Position
Unknown
AA seq
1949 aa
AA seq
DB search
MTRTRKQSKAAAAAAVDTGTAETSPAPPTLQQTQTQAELHLAIPDDINLDVLSTLLPDAQ
LDVPSADTVVTLYRLVLAQVSDSDLLHRELEETKAELQRKDVELDQALQDRESAVRELET
VSGSLQNELNQTRQEKEEILASKVALGAQLASLSTSQSSTSTEVESLKHRIEDVEREKRD
LVGVVSRLKEDATQREEEIQTLRGNLKQARQEYQALESQVRELRSTETSTKYKLDSLSQQ
LKLARDEAERASADLVAKSEEFAKYRRTKHAEFAQLQAAHDSLVQTHAATESSLKTLQSS
HTAQSHQLTQTLARIQDLTGQLAEQEATYSSEAAGLKRLVEMMEEREAQAKAIVENIEKE
WAGVGERAERREVVLREEIEAQRQRAEEAEGRISELQRVLDSLDRGEFPIPGTPGGGVPF
TPARGVPVTPGSRASGEFLGMEGMMGLSPTVAMASRAQRGGKTFTEVYADYVKLQDEYAK
KCAEYDHMDRTLAAVLAQIEERAPILAQQRQEYERLQSEASLLASQLSQAIAERDANATA
AEENGQKLVKSTREIEMLNQQLNDLGHQVQALLKELGRRQDSSIPSDYELDANTTIQPAE
NIEAVITNNLVLFKSIPALQEQNQKLLKVVRELGSKMEMEEREYREQLEAEQQAALQEAY
TAVKELQDQLENQKRSGEATIQAYHKERDALKSMLVRERGMAGHSNGISLDEEMTDPSEA
VKELEEVQAHFETFKTEMGVDSGRLREDLIAARSEKAQFSAQLAKANAKVEYLNDRQRML
QEQNAMQSKEIDNLSRRNQELYDQYARVDIECNRVSEDLVFATTVIEQLRNETANLRAEK
NIWESVQARLVEENKSLAMERSHLSDLMANVQRMHHDLERSGENDRRRLESQIQMLENQT
QDLRSQLSQERDAARHTALQKDLELKELRTKIEKLNEDYAKTREVLVAAETSKKHLEDQV
EQLTRHLRGNEEKLAVYERRVSGTPAAFNHTNEGLSREQQLEAEVADLRSALKVAEVDLA
TARSHVQQFQEISQANETALATLTATYDEYKASTEAQLAQRESGFNAMLMKLNSVQQELV
QIQEKNVELQRTFETERTAWQQDRKTLEGTIFELSTSERSSDNERAAREEEVRQFEERAR
AVEDRYGREVLAHAEAIKTIDTLRQQLSQAQAKVRDNLAAAETARAKLAASESSWKQQRE
ALDKEIADLNARIKDLTTQNNLLHQHLESVSSQAARIREAADSSAAPVTGDGDSAEDVNT
KLSELRSVVAYLRKEKEIVDLQLELSKQESTRLRTQVDHLDKSLEETRKTLSEASPRLST
CSMTMLLTSPYQERERAVEAAASEAQHAELVERINQLSILRESNATLRAECDSHAKRAKA
LETKLQQLSSELDPTKEQLRLARAELEARNQQVRQLEEELRRWQERNASLLSKYDRIDPA
EVQVLKEQIETITAAKASLEEAQRQQQERITQLEATNRRHIETGKKNNEIMKRRIATVEA
EKSEQLGKLQAELESVTAERDTLKTSESSVGSSREQELNEQLQSLQTEKAALAAQVTELQ
AAAAVAASSIPDAELAAKLAHIEKEHNELLAEKSAWVIASSSPAGAEGVTDAEKAELTKA
RDEAIAQAKAATERAEQLIAEINSLKSSIDNLNKERQEVRAARLAEQKKVVATIKQAVET
ALAKQKAELQSQGNTEAVARHAEELRALEERLKKQHEEELKRAVDDAKAAIAANPDQQAA
IEAAVSARLRELQEKHEQEVTAAIDRGRMEATTKMKLKDAQLVRAQNRLKELEAAHQQLK
AQASTQSPAADTTQPAQAVASSSTAAPAGAQKPAAPRPSGLPQKPGAVPAGATRGRGGAP
RGGARGGAAGGLSIRGAGAPAAAAVSAEVGQTVASPVDGVSIMGAAGKRPREDGEASGDD
SLAKRLKPEGAAKPVQLRRDRVPPPPPSS
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgaccagaacacgaaagcagagcaaggctgcggccgctgctgctgttgacacaggcact
gccgaaacatctcctgcgccgccaacactacaacaaacgcagacccaggctgagctgcac
cttgctattcctgacgacataaacttggatgtgctatccacccttctccccgacgcgcag
ctggatgtaccatcagctgatactgtcgtaaccctctaccggcttgttctcgcgcaggtc
tctgactccgatctgcttcaccgagaactcgaggaaacaaaagccgaattgcagcggaaa
gatgtggaactcgaccaggcgctccaggatcgcgagtctgcggtgcgagagctggaaacc
gtatcagggagtctgcagaacgagttgaatcagacgagacaagagaaggaggagatactc
gcgtccaaggttgcgttgggggctcaattggcctcattatcaacttcacaaagctccaca
tcaacagaagtcgagtccctgaaacatcgcatcgaggatgttgaacgagagaagcgggat
cttgtcggtgtcgtaagcaggctgaaggaggatgctacccagcgtgaagaggagattcag
acgctccgcggtaacctcaagcaggcacgtcaagaataccaggctctggaaagccaggta
cgggaactcaggtcaacagaaacatctaccaagtacaaactcgactcgctttcgcaacaa
ctgaagctcgcgagggatgaagcagagcgcgcatccgcggaccttgttgcaaaatctgag
gagttcgccaagtaccgccgtacaaagcatgccgaattcgcacagctgcaggctgcccat
gactcccttgttcagacacacgctgcaaccgaaagctcgctgaagacgctccaatcatct
cacacggcacagtcacatcagctcacccagactcttgcgcggatccaagacttgacggga
cagctggccgagcaggaggctacgtactcgagcgaagctgcgggccttaagcgtctcgtt
gagatgatggaagagcgggaggcacaggcgaaagccatcgtcgaaaacatcgagaaggag
tgggcaggtgtcggcgaacgcgctgagcgccgagaagttgttctcagggaagagatcgaa
gcgcagaggcagcgtgcagaggaggccgagggccgaatctctgaactgcagagggtcctg
gatagtcttgaccgcggcgagttccctattcctggtacacccggtggcggcgttcctttc
actcccgctcgtggcgtccctgtgactccagggagccgtgcttcaggggagttcctgggc
atggaaggtatgatgggcctaagtccgacagttgccatggccagtcgagcgcagaggggc
ggcaagacgttcacggaggtttatgccgactacgtcaagcttcaagacgagtatgcgaag
aagtgtgccgaatacgaccatatggataggacgttggccgccgttctggctcagattgag
gagagggcacccatccttgctcagcaacgccaggaatatgagcgtttgcagtcagaagca
tcgcttctcgcctcccagctgtcacaggctatcgctgaacgcgatgctaatgcaaccgcc
gctgaagagaatggacagaagctagtgaagagcactcgcgagattgaaatgctcaaccag
cagctgaacgatcttggccatcaggtgcaggcgttgctcaaggaactcggccgccgtcag
gactcctccatcccctcagactatgagctcgacgcgaacactaccattcagcctgcggag
aacatcgaggcggtcatcaccaataacctcgtactcttcaagtctattcccgcgcttcag
gagcaaaatcagaagttgctcaaggtcgtccgcgagctcggttcgaagatggagatggaa
gagagggagtaccgcgagcagctcgaggcggaacagcaagccgcgcttcaggaggcgtac
accgccgtgaaggagctccaggaccagctcgagaaccagaagaggagcggcgaggccacg
atacaggcatatcacaaggagcgcgacgcgcttaagagtatgcttgtgcgtgaacgtggt
atggccggccattcaaacggtatcagccttgatgaagagatgacagacccttctgaggcc
gtcaaggagcttgaggaggtccaggcgcacttcgagacattcaagactgagatgggcgtt
gattctggaaggctgagggaggatcttattgctgcacgcagcgagaaagctcagttctct
gctcagctcgcgaaggcgaacgccaaagtcgagtacctcaatgatcgtcagagaatgctc
caggaacaaaacgcaatgcagtcgaaggagatcgacaacctctcaagacgcaaccaggag
ctctacgatcagtacgcacgcgtcgacatcgaatgcaaccgcgtctcggaggatcttgtc
tttgccacgaccgtgattgagcagctgcgcaacgagacggcgaacctgcgtgcggaaaag
aacatctgggagagtgtgcaagcgcgccttgtcgaggagaacaaaagtctcgcaatggaa
cggtcgcatctgtccgacctcatggcgaacgttcagcggatgcaccatgacttggagcgc
tccggcgagaatgatcgccgtcggcttgaaagccagattcagatgctggagaatcaaaca
caggatctcaggtctcagctgtcccaggaacgtgatgctgctcgtcacacggctctgcag
aaggacctcgagcttaaggagctgcgcaccaagattgagaaacttaatgaggattatgct
aagactcgtgaggttctcgtcgccgctgagacgagcaaaaagcatctcgaagatcaggtc
gagcaactgacacgtcatttacgcggcaacgaagagaagcttgctgtctacgagcgaaga
gtttctggtactcccgctgccttcaaccataccaacgagggcctgagtcgcgaacaacaa
cttgaggcagaggttgctgacctccggtccgccctcaaggtcgccgaagttgaccttgca
accgcccggagtcatgttcagcagttccaagagatcagccaggcaaatgagactgcactg
gctacgctcaccgctacctacgacgagtacaaagcatcgactgaggcgcaacttgctcag
cgggaatccggtttcaacgccatgctaatgaaactcaactccgttcaacaagagctcgtg
caaatacaggagaagaacgtcgagttgcagcgtacctttgagacagaacgtactgcttgg
cagcaggataggaagactcttgagggcaccatcttcgagctcagcacatcggagagaagc
tcagacaatgaacgcgcagctcgagaagaagaagtccgccaattcgaggagcgcgcacga
gccgtagaagacaggtatggtcgagaggttcttgcccatgccgaggcgatcaagaccata
gacacgctccgtcagcagctgtcccaggcccaagcgaaagtgcgcgacaacctcgcggct
gcggagaccgcgcgggctaagcttgctgcgtctgagtccagctggaagcagcagagggaa
gctcttgacaaggagatagctgatctcaacgcgaggatcaaagatctcactactcagaac
aatctcctccaccagcatcttgagtctgtcagctctcaggctgcgcgcatccgggaggcg
gcagattcgtctgcagctcctgttaccggcgatggcgactcagccgaggatgtaaatacc
aagctgtcagagttgcgctcggtcgtggcatacttgcgcaaggagaaagagatcgtggat
ctgcagcttgagctcagcaagcaagaaagcactcgactccgcactcaagttgaccacctt
gataagagccttgaggagacgagaaagacgctttccgaggcgagtcctcgattgtctact
tgttcaatgacgatgttgctgacgtctccgtatcaggaacgtgaacgtgccgttgaggcg
gccgcttcggaggctcagcatgcagagctggttgagcggatcaatcagcttagcatcctc
cgcgagagcaacgctaccctccgtgctgaatgcgactctcacgccaaacgcgccaaggct
ctggagacgaagcttcagcagctttcgagcgagcttgatccgaccaaggagcagttgcgg
ttagctagagccgagcttgaagcacgtaaccagcaagtcaggcagcttgaggaggagctt
cgcagatggcaggagcgtaacgcttcgcttctcagcaagtacgaccgcatcgatcccgcc
gaggttcaagtcctcaaggagcagattgagactatcaccgctgcgaaggccagcctcgaa
gaggcacagaggcagcagcaagagaggatcactcaactcgaggcgacgaaccggaggcac
atcgagaccggaaagaagaataatgagatcatgaagaggaggattgccaccgtcgaggcc
gagaagtccgagcagctcggcaagttgcaggctgagctggagtcggttactgcggagcgg
gacaccttaaagacctccgagtcgtctgttggctcttctcgtgagcaggagctaaatgaa
cagctgcagagcttgcagacggaaaaggctgcacttgcggctcaagttacggagttgcag
gcagcggcagctgtagcggcaagctctattccagacgctgaattggctgcgaaattggcg
catatcgaaaaagaacataacgagttacttgcagagaagtctgcttgggtcattgcatcg
tcgagtcccgcaggagccgaaggtgtcacggacgctgaaaaggcagagctaactaaggcg
cgtgacgaggctatcgctcaggcaaaggccgccacagaacgtgctgaacagcttatagct
gagattaatagtctcaagtcttccatcgataacctcaacaaggagcggcaagaagtgcgt
gctgccaggttggccgaacagaagaaggttgttgcaactatcaagcaagctgtggagacc
gcgctcgcgaagcagaaggctgagctccagagccaaggcaatactgaagctgttgctcgt
cacgccgaggagttgcgcgctctagaggagcgactgaagaagcagcacgaggaggaactc
aagcgtgcagtcgatgatgcaaaagctgccattgcggccaatcctgatcaacaagcagcc
atcgaagccgcagtctccgctcgcctgcgagaactccaggagaagcacgagcaggaagtg
accgccgccattgataggggccggatggaagccacaaccaagatgaagctgaaggacgcc
cagcttgtcagggcgcaaaacaggctcaaagaactcgaggccgcgcatcagcagctcaag
gcacaggcttccacccagagtcctgctgccgatactacgcagccggcgcaagcagttgca
tcctcttctaccgcggctccggccggtgcgcaaaagcctgcagccccgcgtccgagcgga
ctcccccaaaagcccggcgccgtaccagcaggcgccactcgcgggcgaggaggagctccg
aggggtggcgcgcgcggcggagcggctggtggtctctccatccgtggtgcaggggctcct
gctgctgccgctgtctctgcggaagtaggccaaactgtagccagtcctgtcgatggcgtc
tctatcatgggcgccgccggcaagcggccgagagaagatggtgaagcttcgggagatgac
tcgctcgccaagcgactaaagccagaaggtgctgctaagccagtgcagctgcgcagggac
cgtgttcctccaccgcctccatcttcgtag
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integrated database retrieval system
