Phasianus colchicus (Ring-necked pheasant): 116231525
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Entry
116231525 CDS
T07365
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116231525 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoc03021
]
116231525 (POLR1B)
Enzymes [BR:
pcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116231525 (POLR1B)
Transcription machinery [BR:
pcoc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
116231525 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
PBP_GOBP
Motif
Other DBs
NCBI-GeneID:
116231525
NCBI-ProteinID:
XP_031453174
Ensembl:
ENSPCLG00000001792
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MAAATEDGASREPHRLRRRQRPRGGVRRDLPAAHIESFNYAISEGVYRALQDIPPVELAL
KDGRVALTVVGIAISPPVVPKGTLCQEVKVFPAECRGLRSTYRGRLTVDISWSLNGIPQG
TIKQPVGYIPIMVKSKLCNLYNLSPQELIQHHEEEEEMGGYFIINGLEKVIRMLIMPRRN
FPLAMTRHKWKNRGPGFTEYGVVLHCVKDEHSAINMNLHYLENGCVMVNFIFQKELFFLP
LGFALKALVNFTDYQIFEELVKDKKNDTFYVNCVTEMLRAVAEAGCYTQQNVLEYLGKSF
RVKLNLPEWYSNEQAADFIFNKCICIHLTDRTEKFYLLCMMTRKLYAFAKGECMEDNPDS
LMNQEVLTAGQLFLMFLKERLENWLQSVKFILEKRTEKADITINTDSLMKAFSLTTDVTK
SFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFVRYLSHFRCIHRGSAFAQMRTTTVRK
LLPESWGFLCPVDTPDGEPCGLMNHMTAVCEIVTEMVPVTDLPPLLCALGVVPIDATPSK
PYAECYRVVLDGAVVGWVEWDLAPQVAEALRRFKITQEKRFPARAEVVLIPMTGKPSLYP
GLFIFTTPCRMVRPVKNLLYGRKEWIGTLEQVFMNVATMESDVVPGVTTHQELFPHSILS
VVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYLLHTPQSPLVRPRMYD
YYSMDSYPVGTNSVVAVISYSGYDMEDAMIVNKSSWERGFAYGSVIKMESIDLSLKASRG
GDNLVFGIKPGDPNVKEKLDADGLPFVGSILQPGDPFYSYMNLNTGETFTVYYQNKEVGI
VDNIKLCSNDRGTGKFKKACITVRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPFTENG
MVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGAYYDATPFTFTEKNSALKYFGETLVS
AGYNFFGTEKMYSGISGVELEADIFVGVVYYQRLRHMVSDKFQVRTTGPRDSVTNQPVKG
RNVEGGIRFGEMERDALLAHGTSFLLHDRLFSCSDGSEAYVCTSCGSMLSPLLQRPPPSS
VASNRRYSCMLCGRMDTIQVIPVPHVFRYFLAELAAMNIKLRLTLEQ
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccacggaggacggcgcgtctcgggagccgcaccgcttgcgacggcggcag
cggccccgcggcggggtacggcgcgacctgcccgccgcccacatcgagtccttcaactac
gccatcagcgagggggtgtaccgcgccctgcaggacatcccgccggtggagctggcgctg
aaggacggccgcgtggcgctcaccgtggtggggatcgccatctcgccgcccgtggtgccc
aaggggacgctgtgccaggaggtgaaggtcttcccggccgagtgccgggggctgcgcagc
acctaccgcgggcggctcacggttgacatcagctggtcactgaatggcattccacaaggg
actattaaacagcctgtagggtatattccaatcatggtgaagtccaaattgtgtaacctc
tataatctttctccccaagagctcatccagcaccatgaggaggaagaggaaatggggggc
tacttcataattaatggcttagagaaagtaattagaatgctgattatgcccaggcgcaat
ttccctcttgcgatgacaagacacaagtggaaaaacagaggtcctggtttcacagagtac
ggggtagtgcttcactgtgttaaagatgagcacagtgcaataaacatgaatcttcactac
ctggaaaatggctgcgtaatggtgaacttcatttttcagaaagaactgttcttccttccc
ttgggatttgctctaaaggcattagttaatttcacagactaccagatttttgaagagctg
gtcaaagacaagaaaaatgacaccttttatgtgaactgtgttactgagatgctaagagca
gtagctgaagcaggttgttacacacagcaaaacgtcctcgaataccttggaaagagcttc
agagtaaaactcaaccttcctgagtggtacagcaatgaacaggctgcagatttcattttc
aacaaatgcatctgcatacatttgacagacagaactgaaaaattctacctgctgtgtatg
atgacccggaagctgtatgcttttgccaaaggggagtgcatggaggataatccagacagt
ctgatgaatcaagaagtgcttactgcaggacagcttttccttatgttcctaaaggagagg
cttgagaactggttgcaatctgttaaattcattttggagaagagaacagaaaaggccgac
atcaccatcaatacagacagcttgatgaaggcattcagcctgaccacagatgttaccaag
tcatttgagtatcttcttgcaactggtaacctgcgatctaagactggcctgggcatgctg
caggacagtggtctgtgtgtggtgggggacaagctgaattttgttcgctacctttcgcat
ttccgctgcatacacagagggtcggcgtttgcccagatgagaactaccacggtacgcaaa
ctgctgccagagtcctgggggttcctgtgcccagtggacacccctgatggagagccctgc
ggtctgatgaaccacatgacggctgtgtgtgaaatagtgacagagatggttcctgtgaca
gaccttccacctctgttatgtgctctaggtgttgtccccattgatgcgaccccaagcaag
ccatatgctgagtgctaccgcgtggtgctggacggtgcagtggtgggctgggttgagtgg
gacctggctcctcaggttgcagaagccctccggcgattcaagataacacaagagaagaga
tttcctgcacgggcagaagtggtccttatcccaatgacaggaaaacccagtctgtatcct
gggttgttcatcttcactaccccttgtcgaatggtgcggcctgtcaaaaacctgctgtat
ggaaggaaggaatggattggtactctggaacaggtcttcatgaacgtggccaccatggag
tcagacgttgtgcctggagtcaccactcaccaggagctcttccctcacagcattctgagt
gtggtggccaacctcatccccttctctgaccacaaccaaagtccacgaaacatgtaccag
tgccagatgggaaagcaaaccatggggtttccagtgtataactacaaggaccgctcagat
aacaagctgtacctcctccatacccctcagagccctctggtgaggcccagaatgtatgac
tattacagtatggacagctacccagtcggtaccaattcagttgtggctgtcatctcctat
agtggctatgacatggaagatgcaatgattgtgaacaaatcttcttgggagagagggttt
gcttacggaagtgttatcaagatggagagcattgacctttcccttaaagctagcagggga
ggtgataatttagtatttggtatcaagcctggggacccaaacgttaaggagaagttggat
gctgatggattgccttttgttggctccatcctgcagcccggggacccgttctacagctat
atgaacctcaacacaggggagaccttcactgtgtactaccagaataaagaagtcggcatt
gtagacaacatcaagctgtgcagtaatgaccgtggcactgggaaattcaagaaggcttgc
atcaccgtgagagttcctcgaaacccaactgttggagacaaatttgccagccgccatggg
cagaagggcatcctgagccagctctggcctgttgaagacatgccgttcacggagaatggg
atggttccagacatcctcttcaacccccatgggttcccctcccgtatgaccatcgggatg
ttaattgagagcatggcggggaagtcagcagcactgcacggcgcctactacgatgccact
cccttcaccttcacggagaaaaactccgccttgaagtactttggtgagactttggtgagc
gcgggctataacttctttgggacagagaagatgtacagtggaatcagcggcgtggagctg
gaggcagacatctttgtgggagtcgtgtactaccagcgcctgcgccacatggtctccgac
aagttccaggtgaggacaacgggaccccgggattccgtcaccaaccagcccgtcaagggg
aggaacgtggaaggggggattcgctttggtgagatggagcgtgatgcgttgttggctcac
ggcacctccttcctgctgcacgaccgcctgttcagctgctcagatggctctgaagcctat
gtttgcacgagctgcggcagcatgttatctcctctgctccagcgcccaccaccttcctct
gtggcaagcaacaggaggtattcctgcatgctctgtggcaggatggacaccatccaggtc
atcccagtgccccacgtcttccggtacttcttggcagagctggcagccatgaacatcaag
ctaaggctcacgctggagcagtaa
DBGET
integrated database retrieval system
