Pseudomonas coronafaciens pv. oryzae: POR16_05095
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Entry
POR16_05095 CDS
T08147
Name
(GenBank) EAL domain-containing protein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
POR16_05095
Enzymes [BR:
pcof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
POR16_05095
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
FtsL
Motif
Other DBs
NCBI-ProteinID:
QGL55751
LinkDB
All DBs
Position
complement(1140489..1142540)
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AA seq
683 aa
AA seq
DB search
MKLELKNSLSVKLLRVVLLSALLVGVVLSCAQIVFDAYKTRQTVANDAERILGMFRDPST
QAVYSLDREMGMQVIEGLFQDDSVRMASIGHPNETLLAEKDRPLKASSTRWLTDLILGQE
RSFTTQLVGRSPYSEYYGDLRITLDTANYGEGFLFNAGVIFIAGVLRALAMGLVLYLVYH
WLLTKPLSKIIEHLIAINPDRPSEHQLPLLKGHEKNELGIWVNTANQLLASIERHTYLRH
EAENNLQRMAQYDFLTGLPNRLQLQTGLDRILEDAGRQQHRVAILCVGLDDFKGINEQFS
YQSGDQLLLALADRLRAHSGRLGALARLGGDQFALVQANIEQPYEAAELAQNILDELEAP
FVVGDQQIQLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKARSRNRYQFYIASVDSEMR
RRRELEKDLREALPRNQLYLVYQPQISYVDHRVVGVEALIRWQHPEHGLVPPDVFIPLAE
QNGTIIVLGEWVLDQACRQLREWLDQGFTDLRMAVNLSTVQLHHAELPRVVNNLLQIYRL
PPRSLELEVTETGLMEDITTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDLIDDDDDATIVRAIIQLGKSLGMQVIAEGVETVEQEAYVVTEGCHEGQGYLYS
KPLPARELLAYLKQGRQGSAALH
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctggaactcaagaacagcctgtcggtgaagctgctgcgcgtcgtgctgctttca
gcacttctggtgggcgtcgtgttgagctgtgcgcaaatcgttttcgatgcgtacaagact
cgacagactgtcgccaacgatgccgaacgcattctcggcatgttccgcgatccttcgact
caggccgtctacagcctcgatcgcgagatgggcatgcaggtcatagagggcctgtttcag
gatgactcggtgcgcatggcgtctatcggccatcccaacgaaacccttctcgcagaaaaa
gaccgtcccctgaaagcctcttcaacccgctggctgaccgacctgatcctcggtcaggaa
cgcagcttcaccacacaactggtgggccgcagcccttacagcgagtattacggcgacctg
cgtatcaccctggacaccgccaactatggcgaaggttttctgttcaatgccggggttatc
ttcatcgctggcgtgctgcgcgccctggcgatgggcttggttctgtacttggtctatcac
tggttgctgaccaagccgctgtcgaaaatcatcgagcacctgatcgccatcaatccggac
cggcccagcgagcatcaattgccgctgctcaagggccacgaaaaaaacgaattggggata
tgggtcaacaccgccaatcagttgctggcctccatcgagcgccatacctacctgcgtcac
gaggcggaaaacaacctgcagcgcatggcgcaatacgacttcctgaccggcctgcccaat
cggcttcagttgcagaccgggctggacaggattctggaggacgccgggcgtcagcaacat
cgggtcgcgattctctgcgtgggcctggacgacttcaaaggcatcaacgaacagttcagc
tatcagtcgggtgaccagttattgctggccctggcagaccggctgcgcgctcacagcgga
cgcctcggcgcactggcgcgactggggggcgatcagtttgcgctggttcaggccaacatc
gagcaaccctatgaagcggcagagctggcgcagaacattctggacgagctggaagcacct
tttgtggtgggtgatcagcagatccagctgcgagcgaccatcggcattaccctcttcccc
gaagacggcgacagcaccgagaagttgctgcagaaagccgaacagaccatgaccctggcc
aaggcccgttcgcgcaatcggtatcagttctacattgccagcgtggacagtgaaatgcgc
cgtcgacgtgaactcgaaaaagacctgcgcgaagccctgccacgcaatcagctttatctg
gtctatcagccgcagatcagctacgtcgatcaccgcgtggtcggcgtggaggcgctgatc
cgctggcaacaccccgagcacggtctggtgccgccagacgtattcattcctctggccgaa
caaaacggcactatcatcgttcttggtgaatgggtgctcgatcaagcgtgtcgccagttg
cgcgagtggctcgatcaaggctttaccgatctgcgcatggcggtcaacctgtcgactgtg
caactgcaccatgccgagctgccacgcgtggtcaacaacctcttgcagatctatcgtctg
ccgcctcgcagcctggaactggaagtcactgaaaccggcctgatggaagacatcaccacg
gccgcccagcacctcctcagcctgcggcgctctggcgcgctgattgccatcgatgatttc
ggcaccggttactcatcactgagttacctgaaaagcctgccactggacaagatcaagatc
gacaagagcttcgttcaggacctcattgacgacgacgatgacgcgaccattgtgcgtgca
atcatccagttgggtaaaagcctgggcatgcaagtcattgccgaaggcgtggagactgtc
gagcaggaggcctacgtggtgaccgaaggctgccatgaaggccaaggctacctgtacagc
aagccgctgcccgctcgggaattgctggcctacctgaagcagggtcgacagggcagcgct
gcgttgcactga
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