Pseudomonas coronafaciens pv. oryzae: POR16_13410
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Entry
POR16_13410 CDS
T08147
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof00500
Starch and sucrose metabolism
pcof01100
Metabolic pathways
pcof01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
POR16_13410 (glgX)
Enzymes [BR:
pcof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
POR16_13410 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GHL5
Motif
Other DBs
NCBI-ProteinID:
QGL57269
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Position
2973694..2975877
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AA seq
727 aa
AA seq
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MNTKSTTAADDSSAQHDNPASTPTRIREGLPFPLGASWDGLGVNFALFSANATKVELCLF
DSTGEVEIERIELPEYTDEIYHGYLPDAHPGLIYGYRVYGPYDPKNGHRFNHNKLLIDPY
AKQLVGELKWSEALFGYTIGHPDGDLSFDERDSAPFVPKSKVIDEAYTWGRDQRVGTPWD
KTIFYETHVRGITMRHPEVAEELRGTFAGLGSAPVVEHIRKLGVTSVELLPIHAFVNDQH
LLQKGMTNYWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHHAGLEVILDVVYNHTAEGN
ELGPTLSMRGIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQMVTDSLRYWASEMH
VDGFRFDLATILGRYHDGFDERHSFLVACRQDPVLRQVKLVAEPWDCGPGGYQVGGFPPG
WMEWNDKFRDTVRAFWKGDEGQLADFAARMTASGNMFNQRGRRPQASVNFITAHDGFTLH
DLVSYNDKHNEANDENNQDGSNNNLSWNHGVEGPTEDQDINTLRLRQMRNFFATLLLAQG
TPMIVAGDEFARTQHGNNNAYCQDSEIGWINWDLDEDGEALLKFVTRVIKLRQSYPILRR
SRFLVGDYNEEIGVKDVTWLAPNGEEMSVEQWHDANGRCLGMLMDGRAQETGIRRPGADA
TLLLVVNAHHDGVNFTLPEVPEGTHYECLIDTNQDDARNKEQFAFGSEYTVTPRSLLLFE
LKHEDPQ
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgaagtccactaccgcggcagatgacagctccgctcagcatgacaatcctgcc
agtaccccgacgcgcattcgtgaggggctccccttcccccttggtgcgagctgggacggg
ctgggcgtcaactttgccttgttctccgcgaacgccaccaaggttgagctgtgcctgttc
gattcgaccggcgaagtagaaatcgaacgtatcgaacttccggaatacaccgacgagatc
taccacggctatctgcccgatgcgcacccaggcctgatctacggctaccgcgtctacggc
ccttacgatccgaagaacggccatcgcttcaaccacaacaagctgttgatcgacccgtac
gccaaacaactggtcggcgaactgaaatggtcagaagcactgttcggttacaccattggc
caccccgatggcgacctgagcttcgatgaacgcgacagcgcgccattcgtgccgaaaagc
aaggttatcgacgaggcctacacctggggccgcgaccaacgtgtcggcacgccttgggac
aagaccattttctacgagacccatgtgcgcggcatcaccatgcgccaccctgaagtcgcc
gaagagctgcgtggcacgtttgccggtctgggatcggcacctgtcgtcgagcatattcgc
aagctgggcgtgacctccgtagagctgctgccgatccatgcgttcgtcaacgatcagcat
ctgttgcaaaaaggcatgaccaactattggggctacaacagcatcgcgttctttgccccg
gacccgcgttatctggcgagcggcaagattgccgaattcaaggaaatggtcgcgcacctg
caccatgccgggctggaagtcattctcgacgtggtctacaaccacaccgcagaaggcaac
gagctgggccctaccctgtcgatgcgcggtatcgacaatgcctcatattaccgactgatg
ccggacgacaagcgttactacatcaacgactccggtaccggcaacacgcttgacctgagc
catccttgtgtcctgcagatggttaccgactccctgcgttactgggcgtcggaaatgcat
gtcgatggtttccgcttcgacctggcaaccattctgggtcgctaccacgacggcttcgac
gagcgccacagcttcctggttgcgtgccgtcaggaccctgtactgcgtcaggtcaaactg
gtcgcagagccttgggattgtggcccgggtggctatcaggtcggtggtttcccgccgggc
tggatggaatggaacgacaagtttcgcgacaccgtgcgtgcgttctggaaaggcgacgaa
ggccaattggccgatttcgctgcgcgcatgactgcgtccggcaacatgttcaaccagcgc
ggtcgtcgccctcaggcctcggtgaacttcatcaccgctcatgacggcttcacgctgcac
gacctggtttcgtacaacgacaagcacaacgaagcaaacgacgaaaacaaccaggacggc
agcaacaacaacctgtcctggaaccatggcgttgaaggtccgactgaagatcaggacatc
aatactctgcgcctgcgtcagatgcgcaactttttcgccaccctgttgctggcacaaggc
acaccgatgatcgttgccggtgacgagttcgcccgtacccagcacggtaataacaacgcc
tactgtcaggacagcgagattggctggatcaactgggatctggacgaagacggcgaggcg
ctgctcaagttcgtgacccgagtgatcaagctgcgtcagagctacccgatcctgcgtcgc
agtcgcttcttggtcggcgattacaacgaagaaatcggcgtcaaggatgtcacctggctc
gccccgaatggcgaagagatgagcgtagagcaatggcatgatgccaatggtcgctgcctc
ggcatgctgatggatggccgcgcacaggaaaccgggattcgtcgtccgggtgctgacgcc
acattgctgttggtagtcaatgcacaccacgacggcgtcaacttcacgctgccggaggtg
cctgaaggcacgcattatgagtgcctgatcgacaccaatcaggacgatgcacgcaacaag
gagcaatttgcgttcggttcggaatacaccgttaccccacgttcactgctgctgttcgaa
ctgaagcacgaagatccgcaatga
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