Pseudomonas coronafaciens pv. oryzae: POR16_17265
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Entry
POR16_17265 CDS
T08147
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcof03009
]
POR16_17265 (rimO)
Enzymes [BR:
pcof01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
POR16_17265 (rimO)
Ribosome biogenesis [BR:
pcof03009
]
Prokaryotic type
ribosomal protein modification factors
POR16_17265 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QGL57961
LinkDB
All DBs
Position
3860856..3862199
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AA seq
447 aa
AA seq
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MSTVTTPSAPKVGFVSLGCPKALVDSERILTQLRMEGYEVVATYEDADVVVVNTCGFIDT
AKAESLEVIGEAIKENGKVIVTGCMGVDASVIRSVHPSVLSVTGPQQYEQVVNAVHDVVP
PRQDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AKRLVKSGVKELLVISQDTSAYGVDVKYRTGFWDGQPIKTRMTELCQALGSMGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKILKLMKRPAFEDKTLARIKNWREQCPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDAAIVPDDIK
QDRWDRFMAHQQAISAARLQMKIGKEIEVLIDEVDDRGAVGRCFFDAPEIDGNVFIGLED
GSNVQPGDKIMCRVTDADEYDLWAEML
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgttaccacgccgtccgcccccaaggttggattcgtttctctgggttgcccc
aaggcgctcgttgattcggaacgcatcctgactcaactgcgcatggaaggttacgaagtc
gttgcgacctacgaggacgccgacgtggtcgtggtcaatacctgcggcttcatcgacacg
gccaaggcagagtcgctggaagtgatcggcgaagccatcaaggaaaacggcaaagtcatc
gtcaccggctgcatgggcgtcgatgcgagtgtcattcgcagcgtgcacccgagtgtgctg
tcggtcaccggcccgcagcaatacgagcaagtggtcaatgccgtgcacgacgtcgtgccg
ccgcgccaggatcacaaccctcttatcgatctggtgcccccacaaggcgtcaaactgacc
ccgcgccattacgcttacctgaagatctccgaaggctgtaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaagctggtcagccgtccggtgggcgatgtgctggacgaa
gccaagcgtctggtcaaatccggcgtgaaggagctgctggtgatctctcaggacaccagc
gcgtatggcgtcgatgtcaaataccgcaccggtttctgggacggccagccgatcaaaacg
cgcatgaccgagctgtgtcaggcgctgggttcgatgggcgtctgggttcgcctgcattac
gtctacccgtacccgcacgtcgatgagctgattccgctgatggcggcaggcaagatcctg
ccgtacctggacatcccgttccagcatgccagcccgaaaatcctcaagctcatgaagcgt
ccggcctttgaagacaagaccctggcgcgcatcaagaactggcgcgaacagtgtcccgat
ctgatcatccgctcgaccttcatcgtcggcttccccggtgaaaccgaagaggacttccag
tacctgcttgactggctgaccgaagcccaactggaccgcgtcggttgcttccagtattca
ccggtcgaaggtgctcctgccaatctgctggatgcggccatcgtgccggatgacatcaag
caggatcgctgggatcgtttcatggcccatcaacaggcaatcagcgccgctcgcctgcaa
atgaagatcggcaaggaaatcgaagtgctgattgacgaggtcgatgatcgtggtgccgtc
ggccgttgcttcttcgatgctccggaaatcgacggcaacgtgttcatcggcctggaagac
ggcagcaacgtccagcctggcgacaagatcatgtgccgcgttaccgacgccgacgaatac
gacctgtgggccgaaatgctctga
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