Puma concolor (puma): 112855443
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Entry
112855443 CDS
T08890
Symbol
BRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03440
Homologous recombination
pcoo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112855443 (BRIP1)
03460 Fanconi anemia pathway
112855443 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoo03400
]
112855443 (BRIP1)
Enzymes [BR:
pcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
112855443 (BRIP1)
DNA repair and recombination proteins [BR:
pcoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
112855443 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
112855443 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
112855443
NCBI-ProteinID:
XP_025774896
UniProt:
A0A6P6HHT4
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MASMWSEYTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSVALLCSA
LAWQQSFNGKPVDKSLSKKAEEPLSCCCACHSKNFTNIDLKQGTSHHFNCPSTPPSERYG
TSSTCQDSPEKTTLAAKLSAKKQASIKRDENDDFQVEKKRIRPLETTQQIRKRHCFEKEV
RHLDAKVASGKTTKLSSPLGKINSFSPQNPPGHCSRCCCSTKQGNSQGYSNTTKKDHGGK
SKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCME
LLDGKNGKSCYFYHGVHKISDQHTLQTLEGMCKAWDIEELVSLGKKLKACPYYTARELIE
DAHIVFCPYNYLLDAQIRESMDINLKEQIVILDEAHNIEDCARESASYSVTEVQLWFARD
ELDTMVNNNIRKKDHEPLRAVCYSLINWLEANSEHLVERDYESSCKIWSGREMLLNLHKM
GITTATFPILQGHFSSVLQKEEKVLPIHGREETREVPIISASTQIILKGLFMVFDYLFRQ
NSKFADDYKVAIQQTYSWINQTDSSDKNEFFAQAKSRKRVRQKTAVRMLNFWCLNPAVAF
SDINGKVWTIVLTSGTLSPMKSFSSELGVTFSIQLEANHVINNSQVWVGTIGSGPKGRNL
CATFQHTETFEFQDEVGALVLSVCQTVSQGILCFLPSYKVVLKRQYNDQHSKLRGLLPGR
QWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFSSNPAQYISGLSKWIRQQVQYHSTF
ESAMESLAEFSKKHQKVIDVSKEDRKFIQDSGSTLEVAGLKDNTLTYLSEAASHLPPENP
REGEAKMCVQELHCPKITTSLSLPGDIISRKDQDDPILLEESAQTMKERIVISRSTSPTF
NKQTKRVNWSSFNSLGHYITDEILTAAPKSRSPEDCASSASPFETEKGCKTVLPLTDKCE
SSSLTVDTSLRAVEPCPQSEIVISPIKIDATLLKENYSKQLFYEETLGPDIELSLVGKEA
KLSTSNRASDTEAEDESIYFTPELYDPEDTNEEKNEQVESDRDNRLANNSKCILAEDLFE
IRTEKGVXQEIKAEDCTKLNRLMNIXSKIDDNGSNIKTTHINELDLGKTRETDTKEY
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaatgtggtctgaatatacaattggtggggtgaaaattacctttccttataaa
gcttacccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaagcaa
cattgtttactggagagccctacaggaagtgggaaaagtgtagccttactttgttctgct
ttagcatggcaacaatcttttaatggaaagccggtggacaaaagcttaagtaaaaaagct
gaggaaccattgtcatgttgttgtgcatgccattcaaagaattttacaaacattgacttg
aaacaaggaacttcacatcatttcaattgtccaagtacaccaccttctgaaagatatggc
acttcatcaacttgtcaagactctcctgaaaaaactacgttggctgcaaagctatctgcc
aagaaacaggcttccataaaaagagatgaaaatgatgattttcaagtagagaagaaaaga
attcgacccttagaaactacacagcagataagaaagcgtcattgttttgaaaaggaagtg
cgtcatttggatgcaaaagttgcttcaggaaagaccacaaaactcagctctccattagga
aagataaactccttttctccacaaaatccccctggtcactgttccaggtgttgttgttct
actaaacaaggaaacagtcaaggttactcaaataccactaagaaggatcatggggggaaa
tccaagatacccaaaatatattttgggacgcgcacacacaagcagattgctcagattact
agagaactccggagaacagcatactcaggggtcccaatgactattctttccagcagggat
catacttgtgtccatccagaagtagtgggcaacttcaacagaaatgaaaagtgcatggag
ttgctggatggaaaaaatggcaaatcctgctatttttatcatggcgtacataaaattagt
gatcaacacacattacagactctggaagggatgtgcaaagcctgggatatagaagaactt
gtcagcttgggaaaaaaactaaaggcatgtccgtattacacagcacgggaactaatagaa
gatgctcacatagtattttgtccctacaactatcttctagatgcacaaataagggaaagt
atggatatcaatctgaaagaacagattgtcattttagatgaagctcataacattgaggac
tgtgctcgggagtcagcaagttacagtgtaacagaagttcaactttggtttgctcgagat
gaattagatactatggtcaacaataatataaggaagaaagaccatgaacccctacgagct
gtgtgctatagcctaattaattggttagaagcaaactctgaacatcttgtggaaagggat
tatgaatcatcctgtaaaatatggagtggaagggaaatgctcttaaatttacacaaaatg
ggtatcaccactgctacttttcccattttgcagggacatttttcttctgtccttcaaaaa
gaagaaaaagtcttaccaattcatggtagagaggagacaagagaagtaccgattattagt
gcttcaactcaaataatactcaaaggactttttatggtgtttgactatctttttaggcaa
aacagcaaatttgcagatgattataaagttgctattcaacagacttattcttggataaat
cagactgattcttcagataaaaatgaattctttgctcaagcaaaaagtaggaaacgtgta
agacagaaaactgcagttcgcatgctaaatttttggtgcttaaatccagctgtggccttt
tcagatattaatggcaaagtttggaccattgttttgacatctgggacattatcaccaatg
aaatccttttcatcagaacttggtgttacttttagtatccaactggaggctaatcatgtc
attaataactcacaggtttgggttggcaccattgggtcaggtcccaagggtcggaatctc
tgtgctaccttccagcacacagaaactttcgagtttcaggatgaagtgggcgcacttgtg
ttatctgtgtgtcagactgtgagccaaggaattttgtgtttcttgccatcttacaaggtt
gtactaaagcgacagtacaatgaccagcactccaaactgagaggtcttttacctggtcgt
cagtggtatgaaattcaagcatatagggccttaaaccaggccctaggcaggtgtattcga
cacaaaaatgattggggagctcttattcttgtggatgatcgctttagtagtaaccctgca
cagtatatatctggactttctaaatggatacggcagcaggttcagtaccattcaaccttt
gaaagtgcaatggagtccttggctgaattttccaaaaagcaccagaaagtcattgatgta
tccaaagaggacagaaagtttatacaggacagtgggtctacacttgaagtggccggtttg
aaggacaataccttaacttacttatcagaagcagcaagccatctaccaccagaaaatcct
agggaaggtgaagcaaaaatgtgtgtccaagaactacactgtcctaaaataaccacaagt
ctatctctaccaggagacatcatctcccgaaaggaccaagatgatcctatattattggaa
gagtctgcccagacaatgaaagaaagaattgtgatttccagatcgacaagcccaaccttc
aacaaacagacaaagagagttaattggtctagctttaattctttgggacattatattact
gatgaaattctgactgcagcacctaaatccaggtcaccagaggactgtgcctctagcgct
tccccttttgaaacagaaaaaggatgcaaaacagtcttaccactcactgataaatgtgag
tcctcatctctgacggtagacacatcattgagggcagttgaaccatgccctcagtcagaa
atcgttatttcaccaataaagattgatgctactcttcttaaagaaaattattccaaacag
ctgttctatgaagaaaccctgggtccagacattgaattgtctctagttggtaaagaagct
aaactttctacttcaaatagagcttctgacacagaagcagaggatgaatctatctatttt
acacctgaactttatgatcctgaagatacaaatgaagaaaagaatgaacaagttgaaagt
gatagagataatagattggctaataattcaaaatgcattttagctgaagacctttttgaa
attagaactgagaaaggagtcnnccaagaaataaaagctgaggattgcacaaagttgaat
agactcatgaatattnaaagtaaaattgatgacaatggtagtaatataaaaacaactcat
ataaatgaattagacctgggaaaaactcgtgaaacagatacaaaagaatattaa
DBGET
integrated database retrieval system
