Puma concolor (puma): 112869179
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Entry
112869179 CDS
T08890
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo01524
Platinum drug resistance
pcoo03430
Mismatch repair
pcoo05200
Pathways in cancer
pcoo05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112869179 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112869179 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
112869179 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
112869179 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoo03400
]
112869179 (MSH6)
DNA repair and recombination proteins [BR:
pcoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
112869179 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
112869179
NCBI-ProteinID:
XP_025788047
UniProt:
A0A6P6IIT3
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MSRQSTLYSFFPKSPALNNANKASVRASGEGGGAAAATRASASPGGDAAWSEAEPGPLAG
SASPPEARNINGGLRKSAAPAVPPSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIR
EKGKSVRVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSSKPEILRAMQRADE
ALNKDKIERLELAVCDEPSEPEEEEEMEVGATYSSDKSEEDKEIESEEEVPPKVQGSRRS
SRQIKKRRVISDSESDVGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLDSPVKVASKRK
KMVSGNGALKRKSSRKEMPLATKRSTGISSETKSTLSAFSAPQNSESQAHTGGGCEDSSR
PTFWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNF
DLVIFYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA
RVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKYLLS
LKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFPDDRHCSRFRTLVAHYPPVQVLFEKGNL
STETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEAYFKEKLNEDSGVMLPQVLKG
MTSESDSLGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDRVSATR
PGAVFAKANQRMVLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAP
LCSPYAINDRLDAIEDLMAVPDKISDVADLLKKIPDLERLLSKIHNVGSPLKSQNHPDSR
AIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEVADNFKSKILKQVITLQTKNPEGR
FPDLTIELNRWDTAFDHEKARRTGLITPKAGFDPDYDQALADIRENEQSLLEYLEKQRSR
IGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA
EERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVILF
PEEDTPPFLDLRGSRHPCITKTFFGDDFIPNDILIGCEEEEEESGKAYCVLVTGPNMGGK
STLMRQAGLLAVMAQTGCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASI
LTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNV
AVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAAKLANLPEEIIQKGHRKA
REFEKMTQSLRLFREVCLASERSTIDAEAVPKLLTLIKEL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtacagcttcttccccaagtctccagcgctgaataatgct
aacaaggcctcggtcagggcctcaggtgaaggcggtggtgccgccgctgctacccgggcc
tccgcttctcccggcggggatgcggcctggagcgaggccgagcctgggcccctagcgggc
tctgcgtcgccacccgaggcgaggaacatcaatggagggctgcggaagtcggccgcgccc
gctgtcccccccagttcttgtgacttctcaccaggtgatttggtttgggccaagatggag
ggttacccctggtggccttgcctggtttataaccacccttttgatggaacattcatccgc
gagaaagggaagtctgtccgagttcatgtacagttttttgatgacagcccaacaaggggc
tgggttagcagaaggctattaaagccatatacaggttcaaaatcgaaagaagcacaaaaa
ggaggtcatttttatagttcaaagcctgaaatactcagagcaatgcaacgtgcagatgaa
gccttgaataaagacaagatcgagaggcttgaattggcagtgtgtgatgagccctcagaa
ccagaggaagaagaagagatggaggtaggtgcaacttactcatcagataagagtgaagaa
gataaggaaattgaaagtgaagaagaagtgccacctaaggtgcaaggatctaggcgaagt
agccggcagataaaaaaacgaagggtcatatcagactctgagagtgatgttggtggctct
gatgtggaattcaagccagatgctaaggaggaagggagcagtgatgaaataagcagtgga
gtgggggacagtgacagtgaaggcttggacagccctgtcaaagttgcttcaaaacggaag
aaaatggtgtctggaaatggcgctctcaaaaggaaaagttcaaggaaggaaatgcccttg
gccaccaaacgatcaactggcatttcatcagaaaccaagagcactctgagtgctttctct
gcccctcagaattctgaatctcaagcccacactggtggaggatgtgaggatagtagtcgc
cccactttctggtatcatgaaactttagagtggcttaaggaggaaaagagacgagatctc
cacaggaggcgacctgatcaccccgattttgatgcatccacactctatgtgcctgaggat
ttccttaattcctgtactcctgggatgaggaagtggtggcagattaagtctcagaacttt
gatcttgttattttttataaggtggggaagttttatgagttgtaccacatggatgctctt
attggagtcaatgaactcgggctggtattcatgaaaggcaactgggctcattctggtttc
cctgaaattgcatttggccgatactctgattctctggttcagaagggctataaagtagca
cgagtggaacagactgagaccccggaaatgatggaggcacgatgccggaagatggcacat
atatctaagtatgacagagtggtgaggagggagatctgtagagtcattaccaagggtaca
cagacctacagtgtactggaaggtgacccctctgagaactacagtaagtatcttcttagc
ctcaaagaaaaagaggaggattcctctggccacactcgagtgtatggagtatgctttgtt
gatacctcactgggaaagtttttcataggtcagtttccagatgatcgccactgttctaga
tttaggactctagtggcacactaccctccagtacaagtcttgtttgagaaaggaaatctc
tcaacagaaactaagatgattctgaagggttcattatcctcctctcttcaggaaggtctg
ataccaggctcccagttttgggatgcagccaaaactttgagaactctccttgaagaagca
tattttaaggaaaagttaaatgaggacagtggggtgatgttaccccaggtgcttaaaggt
atgacctcagagtctgattctcttgggttaacaccaggagagaagagtgaattggccctc
tctgctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaagagctttta
tcaatggctaattttgaagaatacattcccttggattctgacagggttagtgctacaaga
cctggtgctgtttttgcaaaagccaatcaacgaatggtgctagatgctgtgacattaagc
aacttggagattttcctgaatggaacaaatggttctactgaagggaccctgctagaaaag
attgatacttgccatactccctttggtaagcggctcctaaagcagtggctttgtgcccca
ctctgtagcccttatgctatcaatgatcgtttagatgctatagaagacctcatggctgtg
cctgacaaaatctctgatgttgcagaccttctaaagaagattccagaccttgagaggctg
ctgagtaaaattcataatgttgggtctcccctgaagagccagaaccacccagatagcagg
gctataatgtatgaagaaactacatacagcaaaaaaaagattattgattttctttctgct
ctagaaggattcaaagtaatatgtaaaattatagagattatggaagaagttgctgacaac
tttaagtctaaaatccttaagcaagtcattactttgcagacaaaaaatcctgagggccgt
tttcctgatttgactatagaactgaaccgatgggatacagcctttgaccatgaaaaggct
cgaaggactggactaattactcccaaagcaggatttgaccctgattatgaccaagctctt
gctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgcagtcga
attggctgtaggaccattgtctactgggggattggcaggaaccgttaccagttggaaatt
ccagagaatttcatcactcgtaatttgccagaagaatatgagttgaaatccaccaagaag
ggctgtaaacgatactggaccaaaactattgagaagaagttggctaatctgataaacgct
gaagagcggagagacgtatcattgaaagactgcatgcggcgactcttctataactttgat
aaaaattacaaggactggcagtctgctgttgagtgcatcgcagtattggatgtcttactg
tgcctggctaactacagtcgagggggtgatggccctatgtgtcgtccagtaattctgttt
ccagaagaagacacaccccccttcttggaccttagaggatcacgtcatccctgcattacg
aagactttttttggagatgattttattcctaatgacattctaataggctgtgaggaagag
gaggaggaaagtggcaaagcttattgtgtgcttgttactggacctaatatggggggcaag
tcgacactcatgagacaggccggcctgttagctgtaatggcccagacgggttgttacata
cctgctgaagtatgcaggctcacacctattgatagagtattcactagacttggtgcctca
gacagaataatgtcaggtgaaagtacattttttgttgaactgagtgaaactgccagtatc
cttacacacgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgca
acatttgatggaacagcaatagcaaatgcagttgttaaagaacttgctgagaacataaag
tgtcgtacattgttttctacccattaccattcattagtggaagattattctcaaaacgtt
gcagtgcgcctgggacacatggcatgcatggtagaaaatgaatgtgaggatcccagccag
gagactattaccttcctatataaattcattaagggagcttgtcctaaaagctatggcttt
aatgcagcaaagcttgctaatcttccagaggagattattcaaaagggacatagaaaagca
agagaatttgagaagatgacccaatcactgcgattatttcgggaagtttgcctggctagt
gaaaggtcgactatagatgctgaagctgtccctaagttgctgactttgattaaggaatta
tag
DBGET
integrated database retrieval system
