KEGG   Puma concolor (puma): 112872025
Entry
112872025         CDS       T08890                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pcoo  Puma concolor (puma)
Pathway
pcoo03020  RNA polymerase
pcoo03420  Nucleotide excision repair
pcoo05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:pcoo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112872025 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    112872025 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    112872025 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcoo03021]
    112872025 (POLR2D)
   03400 DNA repair and recombination proteins [BR:pcoo03400]
    112872025 (POLR2D)
Transcription machinery [BR:pcoo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     112872025 (POLR2D)
DNA repair and recombination proteins [BR:pcoo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112872025 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 112872025
NCBI-ProteinID: XP_025790943
UniProt: A0A6P6IVI6
LinkDB
Position
Unknown
AA seq 142 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggccggaggtagcgatccgcgggccggcgacgtggaggaggatgcctcacagctt
atctttcccaaagagtttgaaacagcggagacactactaaattcagaagttcacatgctt
ctggagcatcgaaagcaacagaatgagagtgcagaggatgaacaggaactttctgaggtc
ttcatgaaaactttaaattacacagcccgtttcagtcgtttcaaaaacagagagactatt
gccagtgtccgcagcttgttgctccagaagaagcttcataagtttgagttggcctgtttg
gccaacctttgcccagagactgctgaggagtcgaaggctctgatcccaagcctggagggg
cggtttgaagatgaggagctgcagcagattcttgatgatatccagaccaagcgcagcttt
cagtattaa

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