Phocaeicola coprophilus: I6J50_12240
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Entry
I6J50_12240 CDS
T07209
Name
(GenBank) discoidin domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
pcop
Phocaeicola coprophilus
Pathway
pcop00052
Galactose metabolism
pcop00511
Other glycan degradation
pcop00600
Sphingolipid metabolism
pcop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
I6J50_12240
09103 Lipid metabolism
00600 Sphingolipid metabolism
I6J50_12240
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
I6J50_12240
Enzymes [BR:
pcop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
I6J50_12240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
F5_F8_type_C
LacZ_4
Glyco_hydro_2
BetaGal_ABD2
CHB_HEX_C_1
Fn3_assoc
CHB_HEX_C
Motif
Other DBs
NCBI-ProteinID:
QRO23809
LinkDB
All DBs
Position
complement(2845825..2849871)
Genome browser
AA seq
1348 aa
AA seq
DB search
MIRKISLTACLLGAVAGYAQTTTSLAGFSYGDVAAPTGKEWESPQELALNKEQPRAWFFA
FSNVDEARKVLPQHSPYWMSLDGTWKFNWVGNPEERPADFYQPAYDVSAWDDVTVPMQWN
VAGIQKDGSLKYGVPIYANQPVIFQHKVEVGDWKGGVMRTPPKDWVTYKHRNEVGSYRRT
FTVPAGWEGREVYINFDGVSSFFYLWVNGHYVGFSKNSRNTASFDVTPYLNKEGGNVVAV
EVYRNSDGSFLEAQDMFRLPGIFRSVSLTSTSKVQVRDLRVIPDLDANYENGSATITADI
RNLDKKTAKGYTMSYTLYANKLYSDENTSVSGVNASAPVLELKKGESTSAVTTLEVKAPN
KWSAETPYRYTLVGQLKDKKGRVVETVSTSFGFRKVEIKDTPASADEFGLAGRYYYINGK
PVKLKGVNRQEISPETGNTITAKQMEEEIMLMKRGNINHVRNSHYSCQNIWYYLCDKYGI
YLEDEANIESHEYYYGEESLSHVPEFEAAHVARVMELAHEHVNAPSIVIWSLGNEAGPGV
NFVKAYDALHRFDASRPVQYERNNDIVDMGSNQYPSIPWVREAVKGKYDIKYPFHISEYA
HSMGNAVGNLIDYWQAIESTNFFCGAAIWDWVDQALYTYDPKTGDRYLAYGGDFGDKPNS
GMFCMNGILFPGHRPKPQYYEVKKVYQNVGVKAVDMTKGEIEVFNKAYFTPLSGYQMVWS
LYKDGQKVQESTAFRGPRNIVGPRESVRYAIPYDFASLDPQSEYFVKVQFLLAQDEPWAK
KGFVQMEEQLPVKAAGVNPSLKEVTASMAKPKMTEEGDFTRVEGNGFVAVFDNKQGTLHS
LVYNGKQMLREGEGPKLDALRAPTDNDNWMYQPWYQNGLHNLKHKVVALKVLEGNKGKSN
TIQLMYTVESQAPNAAALLGGTSGRYSVKEDTSKPFGPDDFKFTTNQIWTIYADGSIELQ
SGITSNNSSLVLPRIGYAMQLPEVLQQYTYYGRGPQNNYNDRKTGAFIEQHTSTVKDQFV
DFPKPQSMGNREEVRWCALTDKEGNGVEFVMNHPLSVSALPWSALEMTLAPHPYQLPKST
GTHLHLDAAVTGLGGNSCGQGGPLEQDRVKAGNYEMSFVIRPVKNGDYVQTAKVAEAGEM
PLSVSRSRNGLVTITSPKAGAQIEYSLNGSKKKQAYTEPFDLRDGGTVTAWYKDNKAVSV
SFSYSKIETIPLEVVYASSEEVGYGDAANLVDGDPNTTWHTMFSVTVAQYPHWVDFDAGE
VKTIKGFVYMPRQDGGSNAVIKDYKLEVSMDGKNWGEPVAKGTFARGNKAQKVMLDQPVK
ARYIRFTGLNSQNGADYAGGAEFSVLAD
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgattcgaaaaatcagtctgacggcttgtctccttggagcagtagccggttatgcacag
acaaccacatcgctggctggattttcctatggcgatgttgcggctccaacggggaaagaa
tgggagtcgcctcaagagttggcattgaacaaagaacagcctcgtgcctggttctttgct
ttttccaatgtagatgaagcacgtaaggtgcttcctcagcacagtccttattggatgtca
ttggatggtacctggaagtttaattgggttggaaacccggaagaacgtccggccgatttt
tatcagccggcctatgatgtatctgcatgggatgatgttacagttccgatgcagtggaat
gttgcaggtattcagaaagacggttccctgaaatatggtgttcccatttatgccaatcag
ccggttattttccagcataaggtggaagtaggcgactggaaaggtggtgtgatgcgtact
cctcccaaggattgggttacttacaagcatcggaatgaagtaggctcttaccgtcgcact
tttactgttcctgccggatgggaaggacgtgaagtatatatcaactttgatggtgtatct
tctttcttctatttgtgggtgaacggacattacgtaggtttttccaagaactcacgtaat
acggcttcttttgatgtgacaccttatttaaataaggaaggcgggaacgttgtagctgtc
gaagtttatcgtaattccgacggttcattcctggaagcacaggatatgttccgtttgccg
ggtattttccgttctgtatccttgacctctacttcaaaagtacaggtacgtgacttgcgt
gtaattcctgatctggatgcaaactatgaaaacggatcggctaccattactgctgatatc
cgtaatctggacaagaaaacagcaaaaggatataccatgtcttataccttgtatgccaat
aagctgtattcagatgaaaatacttctgtgtcaggagtaaatgcttcagctccggttctg
gaactgaagaaaggtgaaagtacttcagcggtaactacactggaagtaaaggctccgaac
aagtggtctgcagaaactccttatcgttatacactggttggtcagctgaaagataagaaa
ggtcgtgttgtagagacggtatctaccagcttcggtttccgtaaagtggaaattaaagat
actccggcatctgctgatgaattcggactggccggacgttattattatatcaatggcaag
ccggtgaaactgaaaggtgtgaaccgtcaggaaatttctccggaaacaggtaataccatt
acagccaaacaaatggaagaagaaatcatgctgatgaagcgtggtaacatcaaccatgtc
cgtaactcacactattcttgtcagaatatctggtattatctgtgtgataagtatggtatt
tatctggaagatgaagccaatatcgaaagccatgaatattattacggtgaagaatctttg
tctcatgttcctgaattcgaagcagctcatgtggcacgtgtaatggaactggctcacgaa
catgtcaatgctccttctattgttatctggtcgctgggtaatgaggccggaccgggtgtg
aactttgtgaaggcttatgatgccctgcatcgttttgatgcttcccgtcctgtacagtat
gagcgcaacaatgacattgtagacatgggttccaaccagtatccgtcaattccctgggta
cgcgaggctgtaaaaggtaagtatgatatcaagtatccgttccatatctcagaatatgct
cactcaatgggtaatgcagtaggtaacctgattgattactggcaggctattgaatcaaca
aatttcttctgcggtgctgcgatctgggactgggtggatcaggccttgtatacttatgat
ccgaagaccggtgaccgttatctggcttatggtggtgacttcggtgataaacccaacagc
ggtatgttctgtatgaacggaatccttttcccgggtcatcgtccgaaaccgcagtactac
gaagtaaagaaagtctaccagaatgtaggtgtcaaggctgttgacatgacaaaaggtgaa
attgaagtattcaataaggcttacttcactccgttgagtggttatcagatggtatggtcg
ctctataaagatggccagaaagtacaggaaagtacggctttccgtggtcctcgtaatatc
gtaggtcctcgtgaaagtgtccgctatgctattccttatgatttcgcatctctggatcct
caaagtgaatatttcgtaaaagtacagttcctgctggctcaggatgaaccttgggctaag
aaaggctttgtacagatggaagaacagcttccggtgaaagcagcaggagtaaatccttca
ttgaaggaagtaacagcttcgatggctaaaccgaaaatgacggaagaaggagattttacc
cgtgtggaaggcaatggattcgtggcagtatttgataataaacaaggtactttgcacagc
ttggtatacaacggcaagcagatgcttcgtgaaggtgaaggcccgaaactggatgcattg
cgtgctccgacagataacgataactggatgtatcagccctggtatcagaatggattgcat
aatctgaaacacaaagtggtagccttgaaggtacttgaaggaaacaagggaaagagcaat
accattcagctgatgtatacggttgagtctcaggctccgaatgcagcggctttgcttggc
ggaacttccggtagatattcagtgaaggaagatacaagtaagccattcggaccggatgac
ttcaagtttacgactaaccagatctggactatttatgcagacggttctattgaacttcag
tcaggcatcacatccaataactcttcattggtattgccccgtatcggctatgccatgcag
ttgccggaggtacttcagcagtatacttactatggacgtggacctcaaaacaactacaat
gaccgtaagacaggtgcctttattgagcagcatacaagcacggttaaagaccagtttgta
gacttcccgaaacctcagagtatgggtaaccgtgaagaagtacgctggtgtgctctgact
gacaaggaaggcaatggtgttgaatttgtgatgaatcatccgttgtctgtatcagcattg
ccgtggtctgcactcgaaatgacacttgctccgcatccttaccagctgccgaagtcaacc
ggtacccatttgcatctggatgcagccgtaaccggtttgggcggtaacagctgtggacag
ggaggaccgttggaacaggatcgtgtgaaagccggtaactacgaaatgagctttgttatt
cgtccggtaaagaatggtgattatgtacagactgcaaaggttgctgaggctggtgaaatg
cctttgtctgtttcccgttcacgtaacggactggtaacaattacttctccgaaagcaggt
gctcagatcgagtattcactgaacggaagcaagaaaaagcaagcctatacagaaccgttt
gatttgcgtgacggaggtacggtgactgcctggtataaagataacaaggccgtaagcgtt
tctttctcttacagcaagatcgagactattcctttggaagtggtttatgcatccagcgaa
gaagtcggttacggagatgctgccaatctggttgacggagatcccaataccacctggcat
acaatgttctcagtaacggttgctcagtatcctcactgggtagactttgatgcaggagaa
gtaaagaccatcaagggatttgtgtatatgcctcgtcaggatggcggttccaatgctgtg
atcaaggattacaaactggaagtcagcatggacggcaagaactggggcgaaccggtagcg
aaaggaacttttgcacgcggaaacaaagctcagaaagtcatgcttgaccagcctgttaag
gcacgttacatccgcttcactggattgaactctcagaatggtgctgattatgcaggtggt
gcagaattctctgtactggcagattga
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