Propithecus coquereli (Coquerel's sifaka): 105819551
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Entry
105819551 CDS
T08746
Symbol
SCN1A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 1 subunit alpha
KO
K04833
voltage-gated sodium channel type I alpha
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
105819551 (SCN1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcoq04040
]
105819551 (SCN1A)
Ion channels [BR:
pcoq04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105819551 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
ATP-synt_B
IQ
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
105819551
NCBI-ProteinID:
XP_012511277
Ensembl:
ENSPCOG00000022772
LinkDB
All DBs
Position
Unknown
AA seq
1857 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKNDDENGPKPNSDLEAGKNL
PFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKIA
IKILVHSYPFSSDXYXLFAHNLXVLCSXITLSIFSILAFRYTFTGIYTFESLIKIIARGF
CLEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNTSLEEHSIEMNITV
NYNGTFVNETVVEFDWKSYIQDSRYHYFLEGFPDALLCGNSSDAGQCPEGYMCVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQAATVTASEHSREPSAAGRL
SDSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRKGFRFSIE
GNRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFE
DNESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPSNGKMHSTVDCNGVVSLVGGPSV
PTSPVGQLLPEGTTTETEMRKRRSSSFQVSMDFLEDPSQRQRAMSIASILTNTVEELEES
RQKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHY
PMTEHFNHVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLVELGLA
NVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ
LFGKSYKDCVCKISSDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLT
VFMMVMVIGNLVVLNLFLALLLSSFSADNLAKLNESSSSSEGSTVDIGAPAEEQPAVEPE
ETLEPEACFTEGCVQRFKCCQISVEEGRGKQWWNLRRTCFRIVEHNWFETFIVFMILLSS
GALAFEDIYIDQRKTIKTMLEYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIV
DVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLL
VCLIFWLIFSIMGVNLFAGKFYHCINTTTGDRFDINEVNNHTDCLKLIERNETARWKNVK
VNFDNVGFGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEESLYMYLYFVIFIIFGSF
FTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQG
MVFDFVTRQVFDISIMILICLNMVTMMVETDDQSEHVTSILSRINLVFIVLFTGECVLKL
ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG
AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGN
SMICLFQITTSAGWDGLLAPILNSGPPDCDPDAVHPGSSVKGDCGNPSVGIFFFVSYIII
SFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSQFA
AALEPPLNLPQPNKLQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEER
FMASNPSKVSYQPITTTLKRKQEEVSAVIIQRAYRRHLLKRTVKQASFTYNKNKIKGGAN
LLVKEDMIIDRINENSITEKTDLTMSTAVCPPSYDRVTKPIVEKHEQEGKDEKAKGK
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcaacttcttcaccagagaa
tctcttgcagctattgaaagacgcattgcagaagaaaaggctaagaatcccaaaccagac
aaaaatgatgatgaaaatggcccaaagccaaatagtgacttggaagctgggaagaacctt
ccatttatttatggagacattcctccagggatggtgtcagagcccttggaggacctggat
ccatactatatcaataaaaaaacgtttatagtattgaataaagggaaggccatcttccgg
ttcagtgccacctctgccctgtacattttaactcccttcaatcctcttaggaaaatagct
attaagattttggtacattcatatcctttttcaagtgattaatattaactgtttgcacat
aatctataagtactttgtagctaaattactttatcaattttttcgatacttgctttcagg
tacaccttcacaggaatatatacttttgaatcacttataaaaattattgcaaggggcttc
tgtttagaagattttactttccttcgagatccatggaactggctcgatttcactgtcatt
acatttgcatatgtgacggagtttgtggacctgggcaatgtctcagcgctgagaacattc
agagttctccgagcattgaaaacgatttcagtcattccaggcctgaaaaccattgtggga
gccctgatccagtcagtgaagaagctctcagatgtaatgatcctgactgtgttctgtctg
agtgtgtttgcgctaattgggctacagctcttcatgggcaacctgcggaataaatgtgtt
caatggcctcccaccaatacttccctggaggaacacagtatagagatgaatataactgtg
aattacaatggcacatttgtaaatgaaactgttgttgagtttgactggaaatcttacatt
caagattcaaggtatcattatttcctggagggtttcccagatgcactactatgtggaaat
agctctgatgcaggccaatgtccagaaggatatatgtgtgtgaaagctggtagaaatccc
aattatggctacacaagctttgataccttcagttgggcttttttgtccctgtttcgacta
atgactcaggacttctgggaaaatctttatcaactgacattgcgtgctgctggaaaaaca
tacatgatattttttgtgctggtcatttttttgggatcattctacctaataaatttgatc
ctggctgtggtggccatggcctatgaggaacagaaccaggccaccttggaagaggcagaa
cagaaagaggccgaatttcagcagatgctagaacagcttaaaaagcaacaggaggcagct
caggcagcaactgtaactgcctcggaacattccagagagcccagtgcggcaggcaggctc
tcagacagctcatctgaagcctccaagttgagttccaagagtgctaaagaaagaagaaat
cggaggaagaaaagaaagcagaaggagcagtctggtggcgaagagaaagatgaggatgaa
ttccataaatccgagtctgaagacagcatcaggaggaaagggtttcgcttctccattgaa
ggaaacagattgacatatgaaaagaggtactcttccccacaccagtctttgttgagcatc
cgtggctccctattttctccaaggcgaaatagcagaacaagccttttcagctttagaggg
cgagcaaaggatgtggggtctgagaacgactttgctgatgatgaacacagcacctttgag
gataacgagagccggagagattctttgtttgtgccccgacgacatggagagcgacgcaac
agtaacctaagtcagaccagtaggtcgtcccggatgctggcagtgtttccatcgaatggg
aagatgcacagcactgtggattgcaatggtgtggtttccttggttggtggaccttcagtt
cctacatcgcctgttggacagcttctgccagagggaactaccactgaaactgaaatgaga
aagagaaggtcaagttctttccaagtttccatggactttctagaagatccttcccaaagg
caaagagcaatgagtatagccagcatcctaacaaatacagtagaagaacttgaagagtcc
agacagaaatgcccaccctgttggtataaattttccaacatattcttaatctgggactgt
tctccatattggttaaaagtgaaacatattgtcaacctggtcgtgatggacccctttgtg
gacctggccatcaccatctgcattgtcttaaatactcttttcatggccatggagcactat
cccatgacggaacatttcaatcatgtgcttacagtaggaaacttggttttcactgggatc
tttacagcagaaatgtttctgaaaattattgccatggatccttactattatttccaagaa
ggctggaatatctttgatggttttattgtgacgcttagcctggtagaacttggactcgcc
aatgtggaaggattatcagttcttcgttcattccgattgctccgagttttcaagttggca
aaatcttggccgacattaaatatgctgataaaaatcatcggcaattcagtgggggctctg
ggaaatctaaccctggtcttggccatcatcgtcttcatttttgctgtggtcggcatgcag
ctcttcggtaaaagctacaaagattgtgtctgcaagatctccagtgactgtgaacttcca
cgctggcacatgaatgactttttccactccttcctgattgtgttccgcgtgctgtgtgga
gagtggatagagaccatgtgggactgtatggaggtcgctggtcaagccatgtgccttact
gtcttcatgatggtcatggtcattggaaacctagtggtcctgaacctctttctggccttg
cttctgagctcatttagtgcagacaaccttgcaaaacttaacgaaagcagtagctcgtcg
gaaggcagcactgtggacattggcgcacctgcggaggaacagcccgctgtggaacccgaa
gaaacccttgaacctgaagcatgtttcaccgaaggctgtgtacaaagattcaaatgttgt
caaatcagtgtggaagaagggagaggaaaacaatggtggaacctgagaagaacgtgcttc
cgaatagttgaacataactggtttgagaccttcattgttttcatgattctccttagtagc
ggtgctctggcatttgaagatatatatattgatcagcgaaagacaattaagactatgttg
gaatatgctgacaaggttttcacttacattttcattctggaaatgcttctaaaatgggta
gcatatggctatcaaacatatttcaccaatgcctggtgttggctggacttcttaattgtt
gatgtttcattggtcagtttaacagcaaatgccttgggttactcagaacttggtgccatc
aaatctctcaggacactaagagctctgagacctctgagagccttatctcgatttgaaggg
atgagggtggttgtgaatgcccttttaggagcaattccatccattatgaatgtgcttctg
gtttgtcttatattctggctaattttcagcatcatgggcgtaaatttgtttgctggcaaa
ttctaccactgtattaacaccacaactggtgacaggtttgacatcaacgaagtgaataat
catactgattgcctaaaactaatagaaagaaatgagactgcccggtggaaaaatgtgaaa
gtaaactttgataatgtaggatttgggtatctctctttgcttcaagttgccacatttaag
ggatggatggatataatgtacgcagcagttgattccagaaatgtggaacttcagcctaag
tatgaggaaagtctgtatatgtatctttactttgttattttcatcatctttgggtccttc
ttcaccttgaacctgtttattggtgtcatcatagataatttcaaccagcaaaaaaagaag
tttggaggtcaagacatctttatgacagaagaacagaagaaatactataatgcgatgaaa
aaattaggatcaaaaaagccacaaaagccaatacctcgaccaggaaacaaatttcaagga
atggtcttcgattttgtaaccagacaagtttttgacataagcatcatgattctcatctgt
cttaacatggtcacaatgatggtggaaacagatgaccagagtgaacacgtgactagcatt
ttgtcacgcatcaatctggtgttcattgtgctgttcaccggagagtgtgtgctgaagctc
atctccctccgccattattattttaccattggctggaatatttttgattttgtggttgtc
attctctccattgtaggtatgtttctggctgagctgatagaaaaatattttgtgtccccg
accctgttccgtgtgatccgtcttgccaggattggccgaatcctacgtctgatcaaagga
gcgaaggggatccgcacgctgctctttgctctgatgatgtcccttcctgcgttgtttaac
atcggcctcctgctcttcctggtcatgttcatctatgccatctttgggatgtccaacttt
gcctatgttaagagagaggttggaattgatgacatgttcaactttgagacctttggcaac
agcatgatctgcctgttccaaattaccacctctgctggctgggatggattgctggcacct
attcttaatagtgggcctcccgactgtgaccctgatgcagttcaccctggaagctcagtc
aagggagactgtgggaacccatctgtcgggattttcttttttgtcagttacatcatcata
tcctttctggttgtggtgaacatgtacattgccgtcatcctggaaaacttcagtgttgct
actgaagaaagtgcagagcccctgagtgaggatgactttgagatgttctacgaggtttgg
gagaagtttgatcccgatgcgacccagttcatggaatttgaaaaactatctcagtttgca
gctgctcttgaacctcctcttaatttgccacaaccaaacaaactccagctcattgccatg
gatttgcctatggtgagtggtgaccgaatccactgtcttgacatcttatttgcttttacg
aagcgggttctgggagagagtggagagatggatgctctccgaatacagatggaagagcga
ttcatggcttccaacccttccaaggtctcctatcagccaatcactacgactttaaaacga
aagcaagaggaagtatctgctgttattattcagcgtgcttacaggcgccaccttttaaag
cgaactgtaaaacaagcttcctttacatataataaaaacaaaatcaaaggtggggctaat
cttcttgtaaaagaagacatgataattgacagaataaatgaaaactctattacagaaaaa
actgatctgaccatgtccactgcagtttgtccaccttcctatgatcgggtgacaaagcca
attgtggaaaaacatgagcaagaaggcaaagatgaaaaagccaaagggaaataa
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integrated database retrieval system
