Poriferisphaera corsica: KS4_26010
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Entry
KS4_26010 CDS
T06996
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcor
Poriferisphaera corsica
Brite
KEGG Orthology (KO) [BR:
pcor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcor03009
]
KS4_26010 (rimO)
Enzymes [BR:
pcor01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KS4_26010 (rimO)
Ribosome biogenesis [BR:
pcor03009
]
Prokaryotic type
ribosomal protein modification factors
KS4_26010 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QDU34531
UniProt:
A0A517YWB9
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All DBs
Position
2992596..2994140
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AA seq
514 aa
AA seq
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MNTENKTNEMATKADSKIETVSFVSLGCPKNLVDSEKMLGLLAEDGLLPVDSDEPADAVV
VNTCGFLEAAKDESIGEINQAVALKEEGLVKRVVVAGCLVQRQRAKLLEWCPGIDAMIGV
FDRDRIIEAVKGPTGFEIGNDIAVELPVYSSIAANAVIAKQHREMGDEVTGYFEEDGGRM
RLTARHYAYLRISEGCNQNCAFCTIPSIRGKMRSKPVDRIVGEARELMNDGAFELNLIGQ
DTTSFGDDIGYEAGLVGMLEGLNGVVKEYGGGWVRLMYAYPSKFTDEMVEAIARLEHVVK
YIDIPLQHINDGVLDRMRRYTSRECIETLLRKLKERVPGIAIRTTFISGFPGETEEQHQE
LVEFVRGFGFENMGVFGYSPEPGTVAGTMYGKGDAVDDETIARRIDELMMTQQTVVFERH
DAMVANEDEVDVLIDAKTDSVLEGEDGDVAGVLYQGRTSRQAPQVDGVTYVHSESGQEYA
LGEIVKCRVIGYDGYDLIAKPVRELEKRVSLPLA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgaaaataagacaaacgaaatggcgacgaaggcggactcgaagatcgagacc
gtctcgtttgtcagtttagggtgcccgaagaacttagttgacagcgaaaagatgctaggg
ctactggctgaggatggactgttgcctgttgacagtgacgagcctgcagatgcggttgtt
gtcaatacgtgcggctttcttgaggcagctaaggatgagtctattggagagatcaatcag
gctgttgctctaaaagaagagggactggtcaaacgtgtggttgtggcggggtgcctggtt
cagcgacaacgggcgaagctgctggaatggtgcccggggattgatgcaatgattggggtg
tttgatcgagatcggattatcgaagcggtcaaaggcccgacgggttttgagatcggtaac
gatattgccgttgaattgccggtgtattcgagtatcgcggcgaatgcggtgattgcaaaa
caacaccgagagatgggggatgaggtcacaggatattttgaagaagatggcggacggatg
cgtctaactgcgcgtcattatgcatatcttcgaataagtgaaggatgcaatcaaaactgt
gcgttctgtacgattccatcgatccgagggaagatgcgcagcaagccggtcgatcggatt
gtgggcgaagcgcgtgagttgatgaatgatggggcattcgagttaaatctgattggtcag
gacacgacgagttttggggatgatattggctacgaagcggggctggttgggatgcttgag
gggcttaatggtgtggtgaaagagtatggtggtgggtgggtgcgtttaatgtatgcgtac
ccttcaaagtttacggatgagatggttgaggctatcgcacgattagagcatgtggtgaag
tatatcgacatcccactgcagcatattaatgatggggtgctagatcggatgcggcggtat
acaagtcgtgagtgcattgaaacgcttcttcggaaattgaaggaaagggtgccggggatt
gcgatcaggacgacttttatcagtgggtttccgggcgagacggaagaacagcatcaggaa
ctggttgagttcgtacgtgggtttggttttgagaacatgggtgtgtttggatactcgcct
gagccgggaactgttgcagggacgatgtatggcaaaggcgatgccgttgatgacgagacg
attgcaagacggattgatgagttgatgatgacacagcaaacggtagtgtttgagcggcat
gacgcgatggttgcgaatgaagatgaagtcgatgttttgattgatgcaaagacggatagc
gtcctggaaggtgaagacggtgatgtggctggcgtgctttatcagggacgaacaagtagg
caggcgccacaggtagatggtgtgacgtatgtgcatagtgagagtggacaggaatatgcg
ttaggtgagattgtgaaatgccgcgtgattgggtatgacggatatgatttgattgcaaag
cctgtgagagaattagaaaaacgcgtatcgctacctttggcatag
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