Prevotella communis: L6468_06885
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Entry
L6468_06885 CDS
T09070
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcou
Prevotella communis
Brite
KEGG Orthology (KO) [BR:
pcou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcou03009
]
L6468_06885 (rimO)
Enzymes [BR:
pcou01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
L6468_06885 (rimO)
Ribosome biogenesis [BR:
pcou03009
]
Prokaryotic type
ribosomal protein modification factors
L6468_06885 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
UKK63472
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Position
1740696..1741997
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AA seq
433 aa
AA seq
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MKTIDFISLGCSKNLVDSENLMGMFEANGFHVTHDSDDPQGEVVVVNTCGFIADAKEESI
NTILEQVARKNAGEVEKIYVMGCLSERYLADLEAEIPEVDGWYGKFNYKELLKRLTPSPS
LLREGSGQTRKLTTPRHYAYIKISEGCDRHCAYCAIPLITGRHQSRPMEEILDEVRWLVS
QGTKEFQVIAQELTYYGIDLYGEQRIAELIEQMADIEGVEWIRLHYAYPTHFPWRLLDVM
RENKNVCRYLDIALQHISDHMLTRMRRNTTKAETMALIERMRREVPGIHIRTTLMVGFPG
ETDEDFQELVDFVKWARFERMGAFAYSEEDGTYSADHYEDDVPEDVKQRRLDKLMRVQQN
ISAEIEAEKVGQTLPVIIDRTEGDYYIGRTEFCSPEVDPEVLIRQDVKLEIGKIYQVKIT
DSEEFDLYGEVIN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgattgattttatttcgcttggttgctctaagaacttggtggacagcgagaac
ctgatgggcatgtttgaggccaatggcttccacgtgacccacgacagcgacgacccgcaa
ggcgaggtcgttgtggtgaatacctgtggttttattgctgacgccaaggaggaaagtatt
aataccatcttggaacaggtggctcgcaagaatgctggtgaggtggaaaagatatatgtg
atgggatgtctctcagagcgctatctggccgacctcgaagccgagattcctgaagtggac
ggatggtacggaaagttcaattataaggagctattaaaaagactcacccccagcccctct
ctgctcagagaggggagtggtcagactcgaaaactgactacgccacgccattatgcctat
atcaagattagtgagggatgtgaccgccactgtgcgtactgcgccatcccgctgattacg
ggcagacaccagagccgccccatggaggagatcctggacgaggtgcgctggctggtgagt
cagggtacgaaggagtttcaggtcatcgcacaggaactgacctactacggcatagacctg
tatggcgaacagcgtattgccgaactcatagaacagatggctgatatcgagggcgtggag
tggattcgtctgcattacgcctatcccacacatttcccctggcgcctgctcgacgtgatg
cgcgagaataaaaacgtgtgccgctacctggatatcgccctgcagcatatcagcgaccat
atgttgacacgtatgcgccgcaacaccacgaaggcggagacgatggcactcatcgagcgg
atgcgacgtgaggtgcccggcatccatatccgcaccacgctgatggtgggattcccaggc
gagaccgacgaggacttccaggagctggtggacttcgtgaaatgggcgcgctttgagcgt
atgggcgcctttgcctattccgaggaggacggtacctattctgccgaccactacgaggat
gacgtgcccgaggacgtgaagcagcgccgactggataagctgatgcgcgtgcagcagaat
atcagtgcggagatagaggccgagaaggtgggacagacgctgcccgtgattatagaccgc
acggagggcgactactacattggtcgcacggagttctgttcgcccgaggtagatcccgag
gtgctgattcgtcaggacgtgaaactggagattggaaagatatatcaagtgaagataacc
gactctgaggagtttgacctctacggagaagtgattaattga
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