Pseudomonas chlororaphis subsp. aurantiaca: JM49_02030
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Entry
JM49_02030 CDS
T03338
Symbol
rsmD
Name
(GenBank) 16S rRNA methyltransferase
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcp03009
]
JM49_02030 (rsmD)
Enzymes [BR:
pcp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
JM49_02030 (rsmD)
Ribosome biogenesis [BR:
pcp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JM49_02030 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
Methyltransf_25
MethyltransfD12
N6_Mtase
PrmA
Trimer_CC
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
AIS10489
UniProt:
A0A3G7KQU1
LinkDB
All DBs
Position
complement(439521..440141)
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AA seq
206 aa
AA seq
DB search
MASPSRPSKKPVHNQHNGVGQLRIIGGEWRSRRLSFPDVPGLRPTPDRVRETLFNWLAPY
VAGAKVLDLFAGSGALFLEALSRGAAMGQALDASNLAVSRLREHLGTLRCTVGQVQTADA
LRYLETQPASRFDLVFLDPPFHQNLLPAACALLEERDWLADDAWVYTESETAPSTLGLPA
NWRLHREQKSGQVYYALWQRMAEIAG
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggccagcccatcgcgtcccagcaagaaacccgtccacaaccagcacaacggtgtgggc
caactgcgcatcatcggcggcgagtggcgcagccgtcgcctgagcttccccgatgtgccg
ggcctgcgcccgactccggaccgggtgcgcgaaaccctgttcaactggctggcgccttat
gtcgccggggccaaggtgctcgatctgttcgccggcagcggcgcgctgtttctcgaagcc
ctgtcccgtggcgccgccatgggccaggcgctggatgccagcaacctggccgtgtcgcgc
ctgcgcgagcacctgggcaccctgcgctgcaccgtcggtcaggtgcagaccgccgacgcc
ctgcgttatctggaaacccagccggccagccgtttcgacctggtgttcctcgacccgccg
ttccatcagaacctgctgccggccgcctgcgccctgctggaagaacgcgactggctggcc
gacgacgcctgggtctataccgaaagtgaaaccgcgccgtcgaccctcggcctcccggcg
aactggcgcctgcaccgcgagcaaaaatccgggcaggtgtactacgccttgtggcaacgt
atggcagagatcgccggttaa
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